good to make the documentation a bit more specific here?
Best
Jannis
S Ellison schrieb am 12:31 Donnerstag, 3.August
2017:
> use
>
> par(mfrow=c(2,2), cex = 1)
This does work as written. But when I first checked single-call setting, an
mfrow change to cex in the same call s
Dear list members,
i am trying to create multiple figures with identical layout (i.e. font sizes
etc.) for a publication created with Latex. To do so (i.e. to get identical
font sizes) I save all plots as a pdf with widths and heights as they would
later appear in the paper (to prevent scalin
Hi David,
thanks for your reply.
On 16.05.2014 23:07, David Winsemius wrote:
On May 16, 2014, at 2:25 AM, Jannis wrote:
Hi R users,
I suspect this is due to yahoo recently changing its handling of DMARC policies.
Yes. It is due to ISP bounces coming back to the ETHZ server. You do not
unces..."
I suspect this is due to yahoo recently changing its handling of DMARC
policies. Is there anything I can do from my side to change this? Or is
the only solution to change the mail provider?
Thanks for any hints
Jannis
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se (see my earlier post:
http://r.789695.n4.nabble.com/maximum-size-of-dump-frames-files-td4689444.html).
Thanks
Jannis
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file with the dumped frames is not
created. Instead, the process on the cluster seems to be halted. When
running the same thing on smaller files (and probably hence smaller
objects in the workspace) my mechanisms walks flawlessly with the
dump.frames file saved.
Any ideas?
Jannis
lve the problem.
Cheers
Jannis
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and provide commented, minimal, self-contained, reproducible code.
can not be found as only the call to foreach creates
it (similar to a for loop), but should not the R check consider this? Or
is my programming poor? Setting i to any arbitrary value before running
foreach makes the error disappear, but this would feel as a really dirty
hack.
Cheers
Jannis
the
symbol you click to start R in the Windows case).
Perhaps this solves the issue.
Jannis
On 18.09.2013 17:54, SOPHIA TSIROPOULOU wrote:
[Previously saved workspace restored]
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(with regards to their
functions). I ask because I will give some advice on ncdf and R to a
group of people highlighting some of the (possible) differences.
Thanks a lot
Jannis
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Thanks for your reply, Gert. I was aware of the documentation. Thanks
for your hint. In addition I have found that running
par(mfrow = c(2,2))
par(cex=1)
sequentially also has the desired result.
Cheers
Jannis
On 13.09.2013 19:01, Bert Gunter wrote:
?par documents this behavior. I think if
setting cex to
a value that would be 1 if modified by mfrow).
In the end my desire to have the software do what I tell it to do and
not what its programmers think I would want to do was one of the reasons
to move away to R from (in)famous Excel ;-).
Cheers
Jannis
Hi Gerrit,
thanks for your suggestion. I want to create some code were I can supply
the 'm*s^{-2}' part as an argument to a function and which evaluates
this as an expression to use Rs mathematical annotation features in the
labels.
Any further ideas?
Jannis
On 12.09.2013 14:
'
plot(1,1, main=expression(paste(a, " [", b, "]")))
This, however, does not work as a and b are not treated as variable
names in this case. Does anyone have a solution for this?
Cheers
jannis
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Hi Mohan,
as I said, it is difficult to help you without beeing able to reproduce
your plots. Could you please send to the list:
1. the exact command you use to create the plot
2. The output of dput(data)
Thanks
Jannis
On 28.08.2013 14:35, mohan.radhakrish...@polarisft.com wrote:
Hi
mps would still be
there). If you need the points as well, use points() to plot a point
plot over the already existing line plot.
Does this solve your problem?
Jannis
On 28.08.2013 13:45, mohan.radhakrish...@polarisft.com wrote:
Hi,
The plot function draws a broken line. The graph bre
set up
the process. I can only debug this error via dum.frames as I run it non
interactively on a cluster machine. When I start the foreach loop
manually from within the debugger() environment, I can not reproduce the
error.
Does anyone have a hint on how to find the cause of this err
library() and require() calls?
Thanks a lot
Jannis
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and provide commented, minimal, self-contained
e is saved.
Cheers
Jannis
On 14.08.2013 16:01, Jannis wrote:
Well, I have made some tests with the 'no save' option. This only
seems to control the saving of .RData files (at least none appeared in
the working directory in my tests). A file called .RHistory is still
created. I can now put
somehow I think that R should provide an option not to clutter the
working directories in such ways. Or to use one central .RHistory file.
Any ideas?
Jannis
On 14.08.2013 14:33, Jannis wrote:
Thanks, I will look into ways to tell ess/emacs to use such options. I
am, however, quite sure that I
Thanks, I will look into ways to tell ess/emacs to use such options. I
am, however, quite sure that I have never answered "yes" to the question
when quitting R.
Cheers
Jannis
On 13.08.2013 20:21, MacQueen, Don wrote:
R --no-save
_
to dig for the solution (or even the just
cause).
Jannis
R version 3.0.0 (2013-04-03)
Platform: x86_64-unknown-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8LC_MESSAGES=en_US
Dear R users,
occasionally I find .Rhistory and/or .RData files cluttered around in my
file structure. Is there a way to tell R not to save such files? Or to
use one central location where to save them (if they are of any use)? I
have looked through options() to no avail.
Cheers
Jannis
ve represents my understanding (which seems to be wrong) of the
respective paragraphs.
Thanks a lot
Jannis
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Thanks a lot to everybody who responded! My solution now looks similar
to Ruis and Davids suggestions.
Jannis
On 28.06.2013 11:00, Rui Barradas wrote:
Hello,
You can solve your problem using only base R, with no need for an
external package. The two instrucitons below are two ways of
t;- ddply(.data = testframe, INDICES= indices, .fun = function(x)
corr(x[,1], x[,2]))
Where the last command would yield the correlations between column 1 and
2 of the first 50 and of the last 50 values.
Any ideas?
Jannis
On 27.06.2013 21:43, Greg Snow wrote:
Look at the plyr package, probably
Jannis
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and provide commented, minimal, self-contained, reproducible code.
not, however, show up for the same errors when
I use installed packages. Do I have to build these packages in a
specific way?
Cheers
Jannis
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PLEASE do read the posting
es seq create such
numbers?
Thanks a lot
Jannis
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-con
.
Cheers
Jannis
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
Well, its mentioned in the function itself by library(xxx) or
require(xxx). Well, most probably codetools is more aimed towards
checking packages in whcih case such information is in the depends
section of the package declaration.
Best
Jannis
On 08.04.2013 21:03, Duncan Murdoch wrote:
On
Thanks for your reply, Duncan. I hoped for an auutomatic way without
manually having to load the packages to exist ... Perhaps this time this
is not the case.
Cheers
Jannis
On 08.04.2013 20:25, Duncan Murdoch wrote:
On 08/04/2013 2:12 PM, Jannis wrote:
Dear list members,
I frequently
help
Jannis
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
definition for ‘xxx’
For example:
test = function() {
require(plotrix)
color.legend()
}
library(codetools)
checkUsage(test)
Can I tell codetools somehow where to look for these functions without
building a full blown package?
Cheers
Jannis
t happens if i would start the
script via source inside R itself.
Thanks again for your suggestions
Jannis
On 14.03.2013 22:47, Rolf Turner wrote:
On 03/15/2013 05:13 AM, Jannis wrote:
Dear R community,
when I source a script into R via:
R --slave < scriptname.R
is the whole script fi
I savely edit the scriptname.R file even when an active R process still
runs the command above?
Thanks for your help
Jannis
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parantheses are balanced (i.e. the code runs when run via source or
inside some function).
Cheers
Jannis
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.
Thanks agian for replies!
Jannis
On 24.01.2013 20:02, Rui Barradas wrote:
Hello,
Sorry, it's RIGHT parenthesis.
Rui Barradas
Em 24-01-2013 18:54, Rui Barradas escreveu:
Hello,
Your function declaration has a syntax error, one left parenthesis too
much. Corrected it wou
ine
something sequential as an argument like:
dummyfunction = function(filters = {a = 1; b > a; b}) {print('test')}
I hope I could clarify my problem.
Thanks a lot
Jannis
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se packages:
[1] stats graphics grDevices datasets utils methods base
other attached packages:
[1] snow_0.3-10
Thanks a lot
Jannis
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PLEASE do read the post
ot want to critisise anyone for sharing his code!
Thanks a lot
Jannis
On 06.12.2012 12:53, Michael Sumner wrote:
Do you want to cause an error or catch one? Try removing the try() and
see if that helps.
This has nothing to do with RNetCDF you could as easily have caught
another more basic error.
O
Hi Pascal,
Well, as i see it, this is no error, just a simple message printed to
the screen claiming that it is an error. All the mechanisms in R to
handle errors (e.g a stop of code execution etc) are, however, not
initiated.
Cheers
Jannis
On 06.12.2012 02:53, Pascal Oettli wrote:
Hi
om that side.
Any Ideas?
Cheers
Jannis
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
everybody has to program his own workaroung.
So, lets see whether this convinces the people reponsible for these base
functions.
Cheers
Jannis
On 18.11.2012 19:02, Rui Barradas wrote:
Hello,
I believe that's a question for r-devel, but good point. It's
docummented that in non
have
any effect). Would it not be more intuitive and practical to allow the
switching off of directory names in both cases?
Thanks a lot
Jannis
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PLEASE do read the posting
there are
more efficient ways to solve this.
Best
Jannis
maaply <- structure(function(
##title<< multivariate version of aaply
##description<< apply a function to slices, vectors in different
(multivariate)
## multidimensional datacubes.
... ##<<
more) in the
same location on another (identically shaped) array.
What would be the most efficient way to do this? Is there any
multivariate version of aaply? Or other functions? Or some memory
efficient and fast way (the datacubes are huge!) to do this by hand?
Thanks a lot
Jannis
similar manner to the tapply function?
For example, in the follwoing case, I would like to combine columns 1
and two into one vector, and columns 3-4 into another:
test = as.data.frame(matrix(1:20, ncol = 5, nrow=4))
test.ind =c(1,1,2,2,2)
Thanks a lot!
Jannis
ion of the word local and the
corresponding boolean values) but if it is, the manual (to me) is
misleading.
Cheers
Jannis
On 22.08.2012 21:25, Noia Raindrops wrote:
Hello,
If argument 'local' is FALSE, 'source' function is evaluating the file in
global environment
and obje
terpretation of the documentation, both versions should do the
same
Thanks for your help!
Jannis
P.S. There seems to be an small typo in the documentation for the
'local' argument ("...FALSE to the environment from source is
called...") in case anybody appreciates
? What is the best place to start digging for the cause of
the error? Running the same line of code interactively or using the
output of dump.frames also does not reproduce the error.
Cheers
jannis
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https
of the global environment to
this function. As a result, i can access all neccessary objects while
debugging. The open question to me is whether a default behaviour of
dump.frames which saves the global anvironment automatically would help
others as well ?
Cheers
Jannis
On 24.07.2012
with recover? The handling looks very much the same as browsing
dum.frame objects.
Cheers
Jannis
On 24.07.2012 16:25, Henrik Singmann wrote:
Dear Jannis,
is there any specific reason you use dump.frames instead of recover? As
far as I see it, options(error = recover) would allow to access the
plot(d)
The only way I found is wrapping a function around the lines of code but
this would mean changing a lot of code.
Any Ideas?
Cheers
Jannis
> sessionInfo()
R version 2.14.1 (2011-12-22)
Platform: x86_64-unknown-linux-gnu (64-bit)
__
7;12/12/2000'), tz = 'UTC')
Only the code below would give me a POSIXct object with the correct time
zone:
as.POSIXct(as.POSIXlt(chron('12/12/2000'), tz = 'UTC'))
Is this a bug or desired behaviour?
Thanks a lot
Jannis
_
The following appears to be pretty "standard" (though not included in
chron) to me:
b = ISOdate(2001,12,12)
format(b, '%j')
or is that what you refer to with
"I know I can make my own using julian" ?
No idea about the other questions though ...
Jannis
On
found a similar discussion here:
http://tolstoy.newcastle.edu.au/R/help/06/02/21727.html
but it stopped before giving me any hint on how to solve the problem or
whether there is a solution at all.
Any ideas?
Thanks
Jannis
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rgs()[4])
b <- as.numeric(commandArgs()[5])
c=a*b
Is ther any way to acess the contents of c in the command line after
running R ?
Cheers
Jannis
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PLEASE do read the p
1:10, 1:10) :
target of assignment expands to non-language object
What could be a way to get this to work?
thanks a lot
Jannis
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backtrace the condition or situation that actually created the error.
Any ideas?
Jannis
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and
.
By the way, is there an easily accessible and search able list of such bugs for
R (just for the future)?
Thanks a lot
Jannis
- Ursprüngliche Message -
Von: Sarah Goslee
An: Duncan Murdoch
Cc: Jannis ; "r-help@r-project.org"
Gesendet: 15:37 Freitag, 9.Dezember 2011
B
tute 1 (minimum) or up to 2
(maximum) digits, i.e. numbers and not the 'e' in the string. Do I misinterpret
something here?
Thanks for any ideas
Jannis
> sessionInfo()
R version 2.14.0 (2011-10-31)
Platform: i686-pc-linux-gnu (32-bit)
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUM
of the R script seems arkward to me but I did this to easily
run "R-2.12.2" or "R-2.14" from the command line.
Does anybody have any advice on how to fix this stuff?
Thanks for your help!
Jannis
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in case there is no error which causes
R to stop.
Thanks, however, for your reply!
Jannis
On Thu, Nov 24, 2011 at 12:52 PM, Jannis wrote:
Dear R users,
I am using dump.frames() to investigate the content of the different
environments in cases of errors or during certain steps of a non
to use in
my case but I could not (yet) figure out how to mimic the convenient behaviour
of dump.frames() to save the whole call stack.
Thanks for any advice
Jannis
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PLEAS
this post for not beating the dead
horse? Thanks anyway, Jay, for your detailed explanations of the origin
of these R packages!
Best
Jannis
On 10/21/2011 02:34 AM, Jay Emerson wrote:
Jannis,
I'm not complete sure I understand your first point, but maybe someone
from REvolution will
for everybody devoting
his time to open source software!
Jannis
On 10/19/2011 01:26 PM, Jay Emerson wrote:
P.S. Is there any particular reason why there are so seldom answers to posts
regarding foreach and all these doMC/doSMP packages ? Do so few people use
these packages or does this have
ould suggest you try to restrict yourself to saving single
vectors from each foreach loop for the sake of simplicity. I myself tried to
save different types of R objects from foreach iterations once and it was a
hard fight against the code
HTH
Jannis
P.S. Is there any particular reason
Thanks to all who replied! With all these possible solutions it will be hard to
find the best one :-).
--- Gabor Grothendieck schrieb am Mi, 5.10.2011:
> Von: Gabor Grothendieck
> Betreff: Re: [R] help with regexp
> An: "Jannis"
> CC: r-h...@stat.math.ethz.ch
> Da
f$', '', sub('^filename_[[:digit:]]_', '' , test))
but this tends to become cumbersome and I was wondering whether there is a more
elegant way to do this?
Thanks for any help
Jannis
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Try this. As you did not supply a reproducible example my code is untested:
1.m.vector[index.vector] <- NULL
or
new.1.m.vector <- 1.m.vector[- index.vector]
Someting equivalent is possible for the matrix.
HTH
Jannis
On 09/30/2011 11:30 AM, Alaios wrote:
Dear all,
I have a numeric
f Brian Ripley
> Betreff: Re: [R] dump.frames, debugger and the "..." argument
> An: "Duncan Murdoch"
> CC: "Jannis"
> Datum: Mittwoch, 28. September, 2011 15:40 Uhr
> On Wed, 28 Sep 2011, Duncan Murdoch
> wrote:
>
> > On 28/09/2011 9:59 A
nment I get the following error message:
Error in get(.obj, envir = dump[[.selection]]) :
argument "..." is missing, with no default
Some googleing showed that this seems to be a more common problem but I was not
able to find any solution.
Any ideas?
Jannis
___
case anybody is digging for the same solution ;-)
Jannis
On 09/08/2011 11:18 AM, Jannis wrote:
Dear list members,
I use the package inlinedocs to create documentation for a package
that I am building. The function package.skeleton.dx() is used to
convert the source *.R file into the *.Rd
something wrong here?
Thanks
Jannis
On 09/06/2011 04:46 PM, Duncan Murdoch wrote:
On 11-09-06 10:26 AM, Jannis wrote:
Dear list members,
i have build a package which contains a collection of my frequently
used functions. To keep the code organized I have broken down some
rather ext
w wise but the
function quickly branches into a complex nesting of other functions.
Thanks for any advice!
Jannis
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Sorry If I miss the point you want to achieve, but why not just:
which(red > 0.5)
or
red[which(red > 0.5)]
if you want to use this col/row wise you could do:
apply(red, 1, function(x)x[x>0.5])
and
apply(red, 1, function(x)x[x>0.5])
?
--- netzwerkerin schrieb am Di, 6.9.2011:
> Von: netz
quot; Manual I expected
this to work. When I load the package, however, I get the error message that
the sub-functions could not be found. Manually sourcing all files in the
/R directory however yields the expected functionality.
In what way am I mistaken he
entries with the values of the respective objects but
I could imagine that there is already something ready made in R to achieve this.
Does anybody have an idea?
Thanks
Jannis
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Well, there is no function called "weeks" in chron. Funny that the help
mentions it.
You can, however, use normal POSIXct objects and extract the week with:
dts <- dates(c("02/27/92", "02/27/92"))
dts.posx <- as.POSIXct(dts)
result <- as.integer(form
reads with detailed description. There are
numerous solutions and most of them point into Dieters or Brian Ripleys
directions.
Jannis
--- Dieter Menne schrieb am Di, 30.8.2011:
> Von: Dieter Menne
> Betreff: Re: [R] Saving a graph
> An: r-help@r-project.org
> Datum: Dienstag, 30.
toupper()/tolower()
are the functions to convert the letters.
lapply()
can be used to apply this to different list elements and
names()
is helpfull to convert the names of your list.
HTH
Jannis
On 08/05/2011 06:05 PM, zhenjiang xu wrote:
Hi R users,
I have a list:
x
$A
[1] "a
Well, strptime is certainly the way to go. You did not provide any
reproducible example so i can just roughly point out the way to go:
1: combine the two colums to one with paste(,collapse='_')
2: strptime() with the corresponding formats (like "%d-%b-%Y_%H:%M:%S"
or simila
you would have found many helpful tutorials.
HTH
Jannis
On 08/05/2011 02:40 PM, Paola Lecca wrote:
Dearl all,
I have to fit a function
y = f(x1, x2)
to data experiemntal data describing the measured behavior of y.
x1 and x2 are the independent variables.
Could you suggest me wich R package
This is a really basic question that is answered in many R tutorials.
Why dont you just google:
"R import csv"
And the first hit will tell you straight away what to do?
Jannis
P.S. I just guessed from your not very specific post that you may want
to import from csv ...
On 08/
Your function only works for the first dimensions (e.g. indices
indicating the positions in the first two dimensions in datacube), correct?
Otherwise it looks very handy! And certainly more elegent than my
function monster!
Jannis
On 08/04/2011 09:58 PM, R. Michael Weylandt wrote:
Hi
Thanks, Gene, for your hint! I indeed did not check any possible
situation and my function was not returning what I intened it to return.
This updated version, however, should. I am sure there are much easier
ways (or ready made functions) to do the same.
ind.datacube = function(
##title<< c
gested behaviors, you could put in a
is.null(Insert) option that returns the desired subset of values. I haven't
tested it completely, but for a few sample inputs, it seems be do as
desired.
Michael
On Wed, Aug 3, 2011 at 5:00 PM, Jannis wrote:
Thanks for all the replies!Unfortunately the s
where Matlab actually is slightly easier to use than R.
Thanks for your help!
Jannis
On 08/01/2011 05:50 PM, Gene Leynes wrote:
What do you think about this?
apply(data, 3, '[', indices)
On Mon, Aug 1, 2011 at 4:38 AM, Jannis wrote:
Dear R community,
I have a general question
(test,2,))
result = do.call(`[`,list(test,2,''))
How can I use the do.call in that way with leaving the second indexing vector
blanc?
Cheers
Jannis
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PLEASE d
esult <- data[rep(as.vector(indices),times=4)]
but this seems rather complicated and also depends on the order of the
dimensions I want to extract.
I do not want R to copy Matlabs behaviour, I am just wondering whether I
missed one concept of indexing in R?
Why dont you plot a stacked barplot with the two values for each depth
(or whatever is on the x axis) besides each other? Another option would
be to add transparency to the fill color of the plot (col=rgb(1,1,1,0.5)).
On 07/29/2011 05:21 PM, Colin Bergeron wrote:
Thanks Jannis,
I am
seem to be "normal" geographical coordinates. Just extract them
and you should have your grid.
A really quick and dirty hack would be to use ncrename to rename the
dimensions into lat/long
Jannis
P.S. I always wondered why the following made it into the posting guide:
When respo
the x/y limits of the two plots to be identical.
HTH
Jannis
On 07/29/2011 04:29 PM, Colin Bergeron wrote:
Dear list,
I want to plot a sample depth curve over a barplot. It would be perfect if
the argument "inside" in the barplot function would be functional, cause I
could just add
posting the result of:
ncdump -h
would help us to understand what kind of data you use.
Jannis
On 07/29/2011 04:44 PM, Ana wrote:
Can someone help me out with a "small" problem?
I've started using netcdf files recently, and I want to extract the grid id
and also the coordinate
would have been redirected to as.POSIXct() which converts all sorts of
objects to POSIXct. I would expect this function to return your desired
format if you feed it with the numeric values that locator() returned.
HTH
Jannis
On 07/29/2011 03:40 PM, cristabel.du...@waldbau.uni-freiburg.de wrote
the whole
function. The only (cumbersome) way I figured out would be to run
system.time for each individual command. Does anybody have a hint on a
function/package that allows to do this automatically?
Thanks a lot
Jannis
__
R-help@r-project.org
about the possible cause of the problem?
Thanks for your help
Jannis
P.S. Posting to the Statet mailing list did not yield any helpful advice.
My system settings are:
WinXP
R version 2.12.0 (2010-10-15)
Platform: i386-pc-mingw32/i386 (32-bit)
locale:
[1] LC_COLLATE=English_United States.1252
code from the
sourcecode of the function directly into the Rd files but I am sure some
googeling will help me :-).
Thanks again for the help!
Jannis
--- Duncan Murdoch schrieb am Mi, 6.7.2011:
> Von: Duncan Murdoch
> Betreff: Re: [R] including figures in html documentation/help
> An
Thanks for your advice Duncan. In which file should I put the
\figure{}
command? I tried the *.Rd file, but the html files created are without the
figure. Are you sure I only need to include the filename and no path?
Jannis
--- Duncan Murdoch schrieb am Mi, 6.7.2011:
> Von: Duncan Murd
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