Re: [R] R-Forge not building packages?

. There is nothing readers of R-help can do, actually. Best, Uwe Ligges __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented

Re: [R] How to use doSMP(revoIPC) with R 2.15.x version

: package ‘revoIPC’ is not available (for R version 2.15.2) Could you let me know how to use it in R ver2.15.x ? See https://stat.ethz.ch/pipermail/r-help/2012-January/301664.html Uwe Ligges Thanks in advance, [[alternative HTML version deleted

Re: [R] overlapping graphs in logarithmic y-axis

, although it makes no sense: matplot(mata, type = l, col = yellow, add = TRUE) Uwe Ligges could you please help me out on it?? thanks in advanceregards eliza [[alternative HTML version deleted]] __ R-help@r

Re: [R] Stripchart colors don't vary after I sort a data frame

enough after 5 seconds, hence it may not be what you aim at... Uwe Ligges # Here are all of the files. # http://chainsaw.thomaslevine.com/overflow.csv # http://chainsaw.thomaslevine.com/original.png # http://chainsaw.thomaslevine.com/sorted.png # Thanks # Tom

Re: [R] overlapping graphs in logarithmic y-axis

just be more specific, try to avoid errors that are not subject of your question, then people can help much better and understand what you are actually going to do. Also,m provide toy matrices. Uwe Ligges , as quoted by majority of experts. i actually wanted to over lap mata and matb

Re: [R] Plot from a jpeg

from the jpeg file? Yes, there are many packages around, One idea: download.file(http://www.user2007.org/photos/r-cake.jpg;, jpfile - tempfile(), mode=wb) library(ReadImages) jp - read.jpeg(jpfile) par(mfrow=c(3,1)) plot(jp) plot(jp) plot(jp) Best, Uwe Ligges Many Thanks

Re: [R] Fw: quantreg installation and conflicts with R 2.15.2

required packages are really installed, please run update.packages(checkBuilt=TRUE) Uwe Ligges Brian Brian S. Cade, PhD U. S. Geological Survey Fort Collins Science Center 2150 Centre Ave., Bldg. C Fort Collins, CO 80526-8818 email: brian_c...@usgs.gov tel: 970 226-9326 - Forwarded

Re: [R] SVM using R

On 30.11.2012 05:08, vivek kumar singh wrote: HI All, I am very new to R tool. Can some one please suggest me some tutorial links for understanding SVM using R. After reading some textbook about the SVM, go ahead and look for ?svm in package e1071. Best, Uwe Ligges Regards, Vivek

Re: [R] How to repeat replication

shouldI write functin. Show us your (reduced but reproducible) code and we may be able to help. Please read the positng guide. Uwe Ligges Thank you, Kamontip [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https

Re: [R] [R-pkgs] New package: gRain - gRAphical Independence Networks

) : unable to find an inherited method for function nodes, for signature graphNEL, missing Are you aware you posted to the mailing list rather than to the package maintainer? Uwe Ligges -- View this message in context: http://r.789695.n4.nabble.com/R-pkgs-New-package-gRain-gRAphical

Re: [R] deleting data of a given date range.

operators on Date objects, so it is also possible to specify arbitrary ranges. Uwe Ligges - Original Message - From: siddanth911 siddanth.srivast...@mu-sigma.com To: r-help@r-project.org Cc: Sent: Thursday, November 29, 2012 6:10 AM Subject: [R] deleting data of a given date range

Re: [R] NA return to NLM routine

see ?constrOptim or other appropriate functions for constrained optimization problems. Uwe Ligges Thank you for your time, Mac Gaulin __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide

Re: [R] CreateThread failure since R 2.15.2 (32-bit)

so that your version of ls fails. Is it the one from Rtools? Uwe Ligges setInternet2(TRUE) require(rJava) .jinit() getCRANmirrors() system(ls , intern = TRUE) Error in system(ls, intern = TRUE) : CreateThread failed My details are as follows: sessionInfo() R version 2.15.2 (2012-10-26

Re: [R] Finding the Degrees of Freedom in a Wilcoxon Test

On 25.11.2012 13:55, sm2284 wrote: Dear R-ers, I am currently running some Wilcoxon tests in R-64. How do I find the degrees of freedom in the output I am receiving? You don't find any number related to degrees of freedom - which seems to be a bit out of context here? Uwe Ligges

Re: [R] Error in Random Effect Panel

? Apparently not. 1. Which error? 2. What is your code to get the error? 3. Why do you think R-forge (a development platform) code is stable and users of R-help now about that code. Uwe Ligges -- View this message in context: http://r.789695.n4.nabble.com/Error-in-Random-Effect-Panel

Re: [R] Import/Export excel files to/from R, without changing the file type

for you, why not try one of the other solutions mentioned in the R Data Import / Export manual? Best, Uwe Ligges On Sun, Nov 25, 2012 at 2:33 PM, jholtman [via R] ml-node+s789695n4650722...@n4.nabble.com wrote: have you tried the 'XLConnect' package? what have you tried, what types of files

Re: [R] gradient

maths, hence certainly nothing for this list. Best, Uwe Ligges Thanks ! :) -- View this message in context: http://r.789695.n4.nabble.com/gradient-tp4650734.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org

Re: [R] How to control plotting formula above lm diagnostic plots?

with the option 'main' or 'cex.main' inside the 'plot' function does not change anything. See ?plot.lm and its argument sub.caption. Uwe Ligges Many thanks Kasia -- View this message in context: http://r.789695.n4.nabble.com/How-to-control-plotting-formula-above-lm-diagnostic-plots-tp4650465.html

Re: [R] bbmle Warning: optimization did not converge

getting In 0:(n - x) : numerical expression has 8 elements: only the first used error messages, which I afraid serious errors. Dist.NLL obviously does not work for a vector of x values. You have to vectorize it. Uwe Ligges Thanks again. -- View this message in context: http://r.789695.n4

Re: [R] Function storing error messages in 32 bit R-2.15.2 version

I think we need the data in order to see if this is a bug or just some numerical issue. Uwe Ligges On 21.11.2012 07:14, Maulik Shah wrote: I am using 32 bit R - 2.15.2 version and working on package ltm. The program does not give me any warning message when I run tpm command for a dataset

Re: [R] scatterplot3d and box3d

colours of different parts of the plot are documented. Best, Uwe Ligges which uses a completely different graphics device/protocol. You can combine plot3d with box3d (or rgl.bbox) By the way, seq(7:12) probably doesn't do what you think it does! __ R

Re: [R] Greek letters on title

(x, main=expression(Time evotion with * alpha==0.2), col=orange) Uwe Ligges Many thanks in advance. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read

Re: [R] Stepwise analysis with fixed variables

you specify the minimal model. Uwe Ligges -- View this message in context: http://r.789695.n4.nabble.com/Stepwise-analysis-with-fixed-variables-tp4650015.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing

Re: [R] read.table

right result! header=TRUE,not header=T. I don't know why not. Because you have a T in your workspace that is not an alias for TRUE? Uwe Ligges -- View this message in context: http://r.789695.n4.nabble.com/read-table-tp871880p4650010.html Sent from the R help mailing list archive

Re: [R] function customization

: n n.cen median mean sd group=1 6 2 0.033 0.05827778 0.08357853 group=2 6 3 0.033 0.0698 0.07925407 The output is produces from the survfit object by survival:::print.survfit just adapt the code for your need and add the columns you like. Uwe Ligges I

Re: [R] Simulation with cpm package

? No: Works for me and completes within 90 minutes. Uwe Ligges Thanks, Chris library(cpm) cpmTypes - c(Kolmogorov-Smirnov,Mann-Whitney,Cramer-von-Mises) changeMagnitudes - c(1, 2, 4, 5) changeLocations - c(50,100,300) sims - 2000 ARL0 - 500 startup - 20 results - list() for (cpmType in cpmTypes

Re: [R] centroid of hclust

On 18.11.2012 14:25, eliza botto wrote: Dear UseRs,i want to find centroid of clusters, which i generated by hclust. Is there a way doing that? i took mean to elements in each cluster to get centroid but i am not sure if i am right? Yes, that is a common definition for centroid. Uwe

Re: [R] Import excel file

On 16.11.2012 16:59, Rui Barradas wrote: Hello, I believe it is, but see package XLConnect. The vignette is very helpfull, with lots of examples. ... and many other ways. Please see the manual R Data Import/Excel that ships with R and has a whole section devoted to Excel. Best, Uwe

Re: [R] Fill in a pdf with colour

?polygon Uwe Ligges Thank you for answering Best regards Nany23 -- View this message in context: http://r.789695.n4.nabble.com/Fill-in-a-pdf-with-colour-tp4649929.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r

Re: [R] area under the curve

-native English speakers (like myself) to understand your problem. Uwe Ligges -- View this message in context: http://r.789695.n4.nabble.com/area-under-the-curve-tp4649943p4649944.html Sent from the R help mailing list archive at Nabble.com. __ R

Re: [R] area under the curve

Show us your code and we can give hints what you did wrong. But at first, please do read the posting guide http://www.R-project.org/posting-guide.html Uwe ligges -- View this message in context: http://r.789695.n4.nabble.com/area-under-the-curve-tp4649943.html Sent from the R help mailing

Re: [R] tol in prcomp

the default and decide afterwards, of course. Best, Uwe Ligges Thank you. -- View this message in context: http://r.789695.n4.nabble.com/tol-in-prcomp-tp4649828.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org

Re: [R] vectorized plotmath expressions via substitute()

, though i just can't seem to locate it :-/ See library(sfsmisc) ?eaxis Or to answer the original question, without an extra package we could simply: plot(1, xaxt=n) axis(1, at=axTicks(1), as.expression(lapply(axTicks(1), function(x) substitute(10^foo, list(foo=x) Uwe Ligges

Re: [R] discrete discriminant analysis

? if someone can help, would be very grateful. Probably not even the author of that function could easily help without a reproducible example - the posting guide for this list asks you to provide one. Uwe Ligges cheers, Catarina [[alternative HTML version deleted

Re: [R] additive interaction for a dichotomous dependent variable (i.e. risk difference)

On 16.11.2012 02:39, sarahw wrote: Did you ever get a response to this or resolve this yourself? You sent a message to the mailing list, but apparently not to the original poster. Uwe Ligges Many thanks! -- View this message in context: http://r.789695.n4.nabble.com/additive

Re: [R] System problem: Sys.time() returns GMT, says NZDT

said Sys.time says NZDT and now it is ... GMT? $version.string [1] R version 2.14.1 (2011-12-22) Try to update anyway. Uwe Ligges Sys.timezone() [1] NZDT I'm a little lost! Worik [[alternative HTML version deleted]] __ R

Re: [R] problem with function qdagum

This is a bug in the unmentioned VGAM package and you have to report it to its maintainer (hence CCing Thomas Yee). Uwe Ligges On 09.11.2012 10:08, Alena888 wrote: I would like to ude the function qdagum, to compite quantiles of dagum distribution, but if I use the form: qdagum(0.1, 4

Re: [R] mergeing a large number of large .csvs

On 06.11.2012 05:24, Benjamin Caldwell wrote: Thanks to you all. Modifying the code to use rbind instead of merge worked like a charm - I can only speculate why. Because merge is not intended for appending. See its help page. Uwe Ligges Best *Ben Caldwell* PhD Candidate University

Re: [R] RMySQL install on windows

have to report the output your got if you want to get any help. Uwe Ligges My R version is 2.15.1 (x64), on Windows 7 (64-bit). I have installed MySQL Server 5.5 (64-bit), and MySQL Connector C 6.0.2 (64-bit). How could you solve those warnings you've mentioned? -- View this message

Re: [R] Bioconductor, merging annotation with list of probeids

On 03.11.2012 14:56, Brawni wrote: i will sorry! anyway it's a data.frame object. isn't that good? And what are you referring to? I do not see any citation in this message? A, some Nabble generated mail... Please do read the posting guide to this mailing list. Uwe Ligges -- View

Re: [R] to print system.time always

) This is roughly 10 times faster on a 100 x 10 matrix. Check the results: all.equal(result1, result2) Uwe Ligges thank u! -- View this message in context: http://r.789695.n4.nabble.com/to-print-system-time-always-tp4648314.html Sent from the R help mailing list archive at Nabble.com

Re: [R] to print system.time always

:col, function(a) cumsum(x[,a]))) user system elapsed 1.400.141.59 Which solves another problem (cumsum of cols rather than rows). Applying it on rows won't be much faster. Uwe Ligges On Sat, Nov 3, 2012 at 11:52 AM, mrzung mrzun...@gmail.com wrote: Hi all; I want

Re: [R] Data set BregFix in package flexmix

help here except for trying all possible seeds on the communities mega-cloud. So why not ask the authors? Best, Uwe Ligges Thank you. Tudor -- View this message in context: http://r.789695.n4.nabble.com/Data-set-BregFix-in-package-flexmix-tp4647876.html Sent from the R help mailing list

Re: [R] Having some Trouble Data Structures

get is: Pathogen_Individuals ID No_of_Effectors Effectors 1 0001 3 2, 3, 4 Uwe Ligges Error in Pathogen_Individuals[1, 3] - c(345, 567, 678) : number of items to replace is not a multiple of replacement length In future I'm also going to have more variables

Re: [R] Updating R 2.15.0 to 2.15.2

On 26.10.2012 15:28, PaulJr wrote: Dear R users, I hope you all are doing great. Is there a way to automatically upgrade my R 2.15.0 to the new R 2.15.2 release instead of having to reinstall the new release? No, you have to install it. Uwe Ligges Any information regarding this would

Re: [R] sas7bdat package running very slowly

/SAS_Datasets/labdata6.sas7bdat) It can take quite a while (if it works at all given your hardware). Uwe Ligges And I'm using R version 2.14.1. Thanks Helen __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do

Re: [R] cannot open gplots libray

not be loaded/ Reinstall the gdata *package*. Uwe Ligges if i run session info the results are: / print(sessionInfo()) R version 2.15.1 (2012-06-22) Platform: x86_64-pc-mingw32/x64 (64-bit) locale: [1] LC_COLLATE=English_United States.1252 [2] LC_CTYPE=English_United States.1252 [3

Re: [R] RWinEdt will not start properly

RWinEdt has not yet been updated to work with WinEdt 7 (which shows some incompatible changes). Please try with WinEdt 6 or earlier. An update is under consideration but may take another month or two. Best, Uwe Ligges On 12.10.2012 18:20, Mark Irwin wrote: When trying to start RWinEdt

Re: [R] bug tracker broken

. The people are working on it. Best, Uwe Ligges Antonio PS: Yes I was trying to report my first bug. It's a conspiracy with p 0.01. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman

Re: [R] help with making figures

the posting guide for this *mailing list*. Uwe Ligges code example you provided. -- View this message in context: http://r.789695.n4.nabble.com/help-with-making-figures-tp4645074p4645216.html Sent from the R help mailing list archive at Nabble.com

Re: [R] Broken Links on http://www.r-project.org

On 04.10.2012 21:03, Hasan Diwan wrote: The R Graphics Gallery has moved to http://gallery.r-enthusiasts.com/ Thanks, fixed. Uwe Ligges and there's another R Graphics Manual at http://rgm2.lab.nig.ac.jp/RGM2 -- H On 26 September 2012 04:56, Viechtbauer Wolfgang (STAT

Re: [R] Format of numbers in plotmath expressions.

)) Best, Uwe Ligges R. T. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible

Re: [R] Errors when saving output from WinBUGS to R

So have you closed WinBUGS regularly (and not via Esc in R) now? Uwe Ligges On 03.10.2012 21:29, yiyiwang wrote: Sorry for any cross messaging. Here are what I've tried and more info. The error sticks :( I installed the latest R2.15.1 (64bit) on my machine, per Uwe's comments. The same error

Re: [R] Error in if (any(ch)) { : missing value where TRUE/FALSE needed

On 03.10.2012 19:47, liang@us.pwc.com wrote: Can someone please help with the error message below? Not really, the message says it all: You cannot improve the AIC since it is numerically -Inf already! Uwe Ligges thanks! Start: AIC=-Inf value ~ 1 + Core_CPI__ + GDP_change

Re: [R] Broken Links on http://www.r-project.org

/rcode.html Thank for letting us know. Changed in the master sources and will go online within 24 hours, Uwe Ligges Best, Wolfgang -- Wolfgang Viechtbauer, Ph.D., Statistician Department of Psychiatry and Psychology School for Mental Health and Neuroscience Faculty of Health, Medicine, and Life

Re: [R] Errors when saving output from WinBUGS to R

. Just close WinBUGS regularly rather than interrupting the R function that executes WinBUGS and waits for its results. You may also want to update to a recent version of R. Best, Uwe Ligges , a warning message occurred: Warning message: running command 'C:/Users/Yiyi/Desktop/winbugs14

Re: [R] ffsave problems

to your PATH environment variable. Uwe Ligges If any can help me with this, I´d really appreciate it. Lucas. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do

Re: [R] will 9 data points work for a regression in R?

: NaN F-statistic: NaN on 8 and 0 DF, p-value: NA Are these homeworks? You have more variables then observations, i.e. no degrees of freedom left! Uwe Ligges __ The information transmitted, including any attachments

Re: [R] how can I adjust the ranges of my y-axis in barplot?

the range of the whole axis by ylim, if you want to control the tick marks, use: ylim=c(0,15), yaxp=c(0, 15, 3) and ylim=c(0,5), yaxp=c(0, 5, 2) respectively. See ?par for details. Otherwise, omit the y axis via yaxt=n and add it separately by a call to axis(). Uwe Ligges because also I

Re: [R] stepAIC in R

? No. If there is no further output nor error message, we can guess: The AIC cannot be reduced by omitting variables. Uwe Ligges Thanks __ The information transmitted, including any attachments, is intended only

Re: [R] options in R

On 03.10.2012 20:00, Santosh wrote: Dear Rxperts, Was wondering if there is any function in R similar to options(time.zone): found in S-Plus that can help in looking at the default timezone settings.. Sys.timezone() Uwe Ligges Thanks much, Santosh [ [[alternative HTML version

Re: [R] modified Ward method

is meant. Best, Uwe Ligges [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented

Re: [R] install.packages on windows

: There is no such package Imtest on CRAN, perhaps you are looking for lmtest? Uwe Ligges Duncan Murdoch __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html

Re: [R] How to write R package

recommend to look into the manual Writing R Extensions which is updated with R and with the changes in the package related mechanisms --- while all our talks and tutorials won't get updated. Probably Duncan's is still correct, but I want to make this remark for the list's archives. Best, Uwe Ligges

Re: [R] Install of R-2.15.1 for Windows (64 bit) on application server

? Probably nothing else required, but most of us do not run such a setup, hence just try it out. Uwe Ligges Many thanks, D -- View this message in context: http://r.789695.n4.nabble.com/Install-of-R-2-15-1-for-Windows-64-bit-on-application-server-tp4644042.html Sent from the R help mailing list

Re: [R] (core) designation on Task View

/recommended functionality in that domain? Yes, basic/recommended from the point of view of the corresponding task view maintainer, at least. Best, Uwe Ligges I don't see it documented anywhere on the site. Thanks for your help. __ R-help@r-project.org

Re: [R] knnFinder Package

/packages/knnFinder/ That page links to the archive with the latest version CRAN knows about. Please ask the former maintainer for more information. Best, Uwe Ligges Thanks [[alternative HTML version deleted]] __ R-help@r-project.org mailing

Re: [R] BRugs has a bug to use OpenBUGS_PATH

help me. The easiest way to get in touch when you have package bugs / questions is to use the maintainer() function with the package name as an argument to get an email. Thanks, got the e-mail, we will take a look and fix, if required, Uwe Ligges Cheers, Michael The issue is: I want

Re: [R] prune in rpart: choose number terminal nodes

is available from the rpart object. Uwe Ligges Thanks in advance, u...@host.com as u...@host.com -- View this message in context: http://r.789695.n4.nabble.com/prune-in-rpart-choose-number-terminal-nodes-tp4643837.html Sent from the R help mailing list archive at Nabble.com

Re: [R] other files in \inst\doc

Is this a bug? Is it forbidden to include such ASCII files? R CMD check --as-cran needs a qpdf installtion that checks if pdfs in that directory could be compressed more efficiently. It is a problem with your setup not having qpdf installed for this check. Best, Uwe Ligges Regards, Ian

Re: [R] Count based on 2 conditions [Beginner Question]

, which works but doesn't seem to be very efficient, especially when testing different values or columns. count=0 for (i in 1:1000) { if(dataset[i,2]5 ind[i,1]==1) { count=count+1}} You probably want count - sum(dataset[,2]5 ind[,1]==1) Uwe Ligges I'm looking for a more efficient/elegant

Re: [R] Error when using Bagplot function

,-3.07 ,-4.91, -4.56 ,-3.79, -3.10, -3.01), c(2.14, -7.18, -0.15 , 2.67, -2.49, -0.89 , 0.96 , 0.59, -4.59)) Can anyone help? If you found a bug in a package, better report to the package maintainer (hence CCing Peter Wolf). Best, Uwe Ligges -- View this message in context

Re: [R] Cannot install package xlsx

On 14.09.2012 15:30, ramoss wrote: It looks like they are all corrupted. I tried several other CRAN sites across the world. How can we notify the package owner? Take a look at the packages CRAN webpage: http://cran.r-project.org/web/packages/xlsx/index.html -- View this message in

Re: [R] Namespaces without packages?

On 13.09.2012 23:47, R. Michael Weylandt wrote: On Thu, Sep 13, 2012 at 6:44 PM, Ray Griner rgri...@sdac.harvard.edu wrote: Dear R-help list - Here's my problem. I have some programs I want to share with other users in the department. I currently tell users to use

Re: [R] when to use I, as is caret

is singular, there are no two-way interactiosn available and it is not changed. Best, Uwe Ligges Thanks in advance, u...@host.com -- View this message in context: http://r.789695.n4.nabble.com/when-to-use-I-as-is-caret-tp4643113.html Sent from the R help mailing list archive

Re: [R] package installation problem.

mirrors. The mirror selected is just not working, hence use another mirror. The other message shows that the CRAN extras repository does not provide binaries for such outdated versions of R. Anyway, upgrading is highly recommended. Best, Uwe Ligges Cheers, M On Thu, Sep 13, 2012 at 12:35

Re: [R] list of funtions

function(par) return(metaf(par,form=i,...)) in your loop. If you want to have it independent if i, why do you specify it? Uwe Ligges __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide

Re: [R] problem while installing packages in r

(and will propagate to the mirrors). Nevertheless, R-2.11.x binaries are no longer supported. Time to upgrade! Best, Uwe Ligges Warning in install.packages : package 'rgdal' is not available Thanks in advance, Ravi. [[alternative HTML version deleted

Re: [R] Package installation errors

to help. You need a 64-bit version of Java for rJava running on a 64-bit R, I guess you only have a 32-bit Java installed. Uwe Ligges Any suggestions/solutions are most welcome Thanks and regards, Santosh [[alternative HTML version deleted

Re: [R] Installing lumi and hdrcde

spelling for bioconductor. Uwe Ligges Fehler in file(filenaReme, r, encoding = encoding) : kann Verbindung nicht öffnen Zusätzlich: Warnmeldung: In file(filename, r, encoding = encoding) : kann 'bioconductur.org' nicht auflösen source (http://bioconductor.org/biocLite.R;) BiocInstaller

Re: [R] 2 (related) problems with RODBC in 64 bit Windows

in no problems. I still see this as a problem of implementation on 64 bit. If that is really an ODBC difference, also something to be reported with 2) below. Best, Uwe Ligges On 2, many thanks, once I gather the courage to address Prof. Ripley I will send him a recollection of my experience. Kind

Re: [R] 2 (related) problems with RODBC in 64 bit Windows

integer (or sizeof(long) between 32 and 64 bit. Don't know, but that is something you may want to report (preferrably including patches) to the package maintainer. Uwe ligges Any chance the problems have the same source in RODBC code and could be addressed in the near future (after apparently

Re: [R] R CMD build error with data files

Christian, my late answer on this one: On 21.08.2012 22:28, Christian Hennig wrote: Dear list, I want to update my prabclus package which I haven't done for quite a while. In the previous version, I had .dat files in my data subdirectory, which I read using .R files. Now R CMD check gives

Re: [R] kernlab | ksvm error

details - or ask the author of tht function. Best, Uwe Ligges Some randomness is involved, and when you get an unfortunate subsample (e.g. if in the internal cross-validation one class is not selected at all) it won't work anymore. __ R

Re: [R] kernlab | ksvm error

= polydot) svm.pol.prd4- predict(svm.pol4, train.data, type= probabilities)[,2] Some randomness is involved, and when you get an unfortunate subsample (e.g. if in the internal cross-validation one class is not selected at all) it won't work anymore. Best, Uwe Ligges

Re: [R] kernlab | ksvm error

Execution halted Does anyone know what the problem is? Any help will be much appreciated. We need a reproducible example. Best, Uwe Ligges Cheers [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https

Re: [R] R - rpart - increasing xerror

on statistical modelling. Best, Uwe Ligges I dont understand what that means. does it mean that my model doesnt fit the data- that there is no trend in the data? i am 100% sure that there must be a trend or correlation in the data. please help me:) CP nsplit rel error xerror

Re: [R] Trouble compiling package on Windows (64 bit)

there. It works for me. Best, Uwe Ligges Thanks. - Original Message - From: Uwe Ligges lig...@statistik.tu-dortmund.de To: Fg Nu fgn...@yahoo.com Cc: r-help@r-project.org r-help@r-project.org Sent: Friday, August 17, 2012 4:45 AM Subject: Re: [R] Trouble compiling package on Windows (64 bit

Re: [R] Get the filename from the given path

answers that at least work for you. Yours has way too many errors or typos. Best, Uwe Ligges [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting

Re: [R] Find and install old package to R 2.11 in UNIX

method. Install from archived package as source. http://cran.r-project.org/src/contrib/Archive Right, but then foreign is a recommended package and is shipped with released versions of R, hence should be available already. Best, Uwe Ligges __ R-help

Re: [R] tikzDevice not available

release of R, install from sources, i.e.: install.packages(tikzDevice, repos=http://R-Forge.R-project.org;, type=source) Uwe Ligges install.packages(tikzDevice, repos=http://R-Forge.R-project.org;) Installing package(s) into ‘C:/Users/N31k/Documents/R/win-library/2.14’ (as ‘lib

Re: [R] Trouble compiling package on Windows (64 bit)

for the package 'KernGPLM' See the R Installation and Administration manual. It tells you how to set up an environment under Windows to be able to install the package from sources. We cannot say more without the actual output of R CMD INSTALL. Best, Uwe Ligges Here is my session info: R

Re: [R] Get the filename from the given path

On 17.08.2012 11:28, Rantony wrote: Hi, Here i have a file path, for eg : - FPath - D:\\MyFolder\\MyFile.txt HOW IS POSSIBLE TO GET THE FILE NAME FROM THIS GIVEN PATH ? basename(FPath) Uwe Ligges - thanks in advance Antony. -- View this message in context: http://r.789695.n4

Re: [R] creation of package failed

*building 'newpackage.tar_0.1-6.gz' Are you sure this is the error message? That should be *building 'newpackage_0.1-6.tar.gz' So we really need to see your package in order to learn why this fails. Uwe Ligges ERROR Packaging into .tar.gz failed When I check

Re: [R] how to change variable names in corrgram diagonal

there - and then write to the maintainer that the docs need to be updates, since labels work rather than being Not used. Best, Uwe Ligges how can I change the variable names in main diagonal? (so that I can put more informative names of variables) I think to understand that this should

Re: [R] creation of package failed

, you must not have spaces between the separate directories. In addition, we need full information what you tried when you said R CMD build and how the directory looked like. Do you have write permission in the parent directory etc. Uwe Ligges Laurent Franckx, PhD Expert VITO NV Boeretang

Re: [R] Masked by GlobalEnv

to ask questions in a way that we can answer. Your code is not reproducible for us, we do not have the data nor do we know whjat you actually expect. Uwe Ligges Graph did not take right R color code. How can i solve this problem?, As i am the newest user of R programme. with regards

Re: [R] Batch Mode for Windows

In that case, you have not added the directory where R.exe lives to the PATH environment variable. Uwe Ligges commands. In other instances it said that the arguments R, CMD, and BATCH were ignored. What specifically should I do to make this work? I thought I was supposed to change

Re: [R] stopping rule in hierarchical Clustering

is probably cluster index. Best, Uwe Ligges Regards Eliza botto [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read

Re: [R] Stopping all code execution when ANY error occurs (OR error handling without try/tryCatch)

Easy: Wrap your code into a function. A function by default exits on the first error. Best, Uwe Ligges On 11.08.2012 10:07, enocko wrote: Hi all, I often run a bunch of code with Run Selection, and, after it's done running, I find there have been like 20 errors, all due to an error

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