Re: [R] R-package imputeTS / warning messages

2022-11-04 Thread Ivan Krylov
Dear Paulo Barata, On Wed, 26 Oct 2022 11:27:54 -0300 Paulo Barata wrote: > In stats::StructTS(data, ...) : >possible convergence problem: 'optim' gave code = 52 and message > ‘ERROR: ABNORMAL_TERMINATION_IN_LNSRCH’ > > The function StructTS is called by the function na_kalman of the > imp

[R] R-package imputeTS / warning messages

2022-10-26 Thread Paulo Barata
Dear colleagues, For data imputation in time series, I am using the R-package imputeTS, using its funcion na_kalman. For some calls to that funcion, I get the following warning message: In stats::StructTS(data, ...) : possible convergence problem: 'optim' gave code = 52 and message ‘ERROR

Re: [R] R package for discrete-time competing-risk anlayses..

2020-05-11 Thread Bert Gunter
Search! "discrete time competing risk analysis" on rseek.org The survival task view on CRAN: https://CRAN.R-project.org/view=Survival Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom Coun

[R] R package for discrete-time competing-risk anlayses..

2020-05-11 Thread Sorkin, John
Can someone direct me to an R package that can run discrete-time competing risk analyses? Thank you, John John David Sorkin M.D., Ph.D. Professor of Medicine Chief, Biostatistics and Informatics University of Maryland School of Medicine Division of Gerontology and Geriatric Medicine Baltimor

Re: [R] R package for meta-analysis from z scores

2020-01-20 Thread Michael Dewey
Dear James Your question really boil down to whether you can estimate tau^2, the between study variance of the effect sizes, if you only have p-values. As far as I can see the answer has to be no. Michael On 16/01/2020 13:10, james poweraid wrote: Hello, I have a set of Z scores from an N=

[R] R package for meta-analysis from z scores

2020-01-20 Thread james poweraid
Hello, I have a set of Z scores from an N=2 studies and I need to run a meta-analysis across the two Z scores for many N variables. I do not have effect sizes and SEs. I realize there are many different meta analysis packages in R, but I only have Z scores and it seems to me this is limiting. I am

Re: [R] R package for genetic analysis of VNTR (variable number of tandem repeats) genotype data

2020-01-02 Thread Bert Gunter
You may get a useful answer here, but you are much more likely to at the Bioconductor website that specializes in this sort of thing. https://bioconductor.org/help/ Cheers, Bert On Thu, Jan 2, 2020 at 12:16 PM Yuan Chun Ding wrote: > Hi R users, > Does any one know a R package for genetic ana

[R] R package for genetic analysis of VNTR (variable number of tandem repeats) genotype data

2020-01-02 Thread Yuan Chun Ding
Hi R users, Does any one know a R package for genetic analysis of VNTR (variable number of tandem repeats) genotype data? For example, performing Hardy Weinberg equilibrium test, calculating heterozygosity and polymorphism information content etc. I am sorry if this question is not relevant to t

Re: [R] R package that translates zip codes into longitude and longitude

2019-05-06 Thread Bert Gunter
For these sorts of questions, it might be more useful if you address these sorts of queries to the package author or maintainer directly. --Bert On Mon, May 6, 2019 at 5:41 PM Nicola Ruggiero < nicola.ruggiero@gmail.com> wrote: > I found this package "zipcode", by Jeffry Breen > (http://www.

Re: [R] R package that translates zip codes into longitude and longitude

2019-05-06 Thread Nicola Ruggiero
I found this package "zipcode", by Jeffry Breen (http://www.jeffreybreen.com/code/). Does anyone have experience working with this one? And do you think it would help with my data, such as I exemplified it in my previous post to the listserv? His blog looks good (https://datamatters.blog/2011/01/

Re: [R] R package that translates zip codes into longitude and longitude

2019-05-06 Thread Jim Lemon
Hi Nicola, There seems to be a big database of this here: http://download.geonames.org/export/dump/ Jim On Mon, May 6, 2019 at 2:47 PM Nicola Ruggiero wrote: > > Hi there, > > I'm looking for a R package that would enable me to add a column to a > data.frame that is itself a translation of zip

[R] R package that translates zip codes into longitude and longitude

2019-05-05 Thread Nicola Ruggiero
Hi there, I'm looking for a R package that would enable me to add a column to a data.frame that is itself a translation of zip codes into longitude and latitude. The column in the data.frame looks like this [begin quote]: waltham, Massachusetts 02451 Columbia, SC 29209 Wheat Ridge , Colorado 800

[R] R package installation error

2019-01-28 Thread Christian Martin Hennig
Hi there, I'm running R version 3.5.2 on Linux Mint. I try install.packages("hierfstat") and get this: ** byte-compile and prepare package for lazy loading Error in rbind(info, getNamespaceInfo(env, "S3methods")) : number of columns of matrices must match (see arg 2) ERROR: lazy loading faile

Re: [R] R package downloading

2018-08-22 Thread Jeff Newmiller
The Bioconductor project does things their own way. Please use their support channels for help with their packages. https://www.bioconductor.org/help/ On August 22, 2018 2:27:47 PM PDT, Spencer Brackett wrote: >Hello all, > >Once the R package TCGAbiolinks or biocLite(“TCGAbiolinks”) is don

[R] R package downloading

2018-08-22 Thread Spencer Brackett
Hello all, Once the R package TCGAbiolinks or biocLite(“TCGAbiolinks”) is done unpacking, how do I go about apply any particular analysis with it? Currently, I am unable to access the consule and edit any further. Would I therefore have to open up a new script? Spencer Brackett [[a

Re: [R] R-Package for Recursive Partitioning without Classification or Regression

2017-08-01 Thread Michal Kubista
Hello Tom, what you describe seems like using hierarchical clustering and plotting a dendrogram to me, even though only in the "visual" way, not in the math behind the algorithms. Are you looking for something like this? https://rpubs.com/gaston/dendrograms Just please note, that this is very far

Re: [R] R-Package for Recursive Partitioning without Classification or Regression

2017-07-31 Thread David L Carlson
ject: [R] R-Package for Recursive Partitioning without Classification or Regression Hello, I have a question related to recursive partitioning, but I cannot find an answer, likely because I don't know how to properly word my Google search query. All recursive partitioning examples, which I

Re: [R] R-Package for Recursive Partitioning without Classification or Regression

2017-07-31 Thread Achim Zeileis
On Fri, 28 Jul 2017, Tom D. Harray wrote: Hello, I have a question related to recursive partitioning, but I cannot find an answer, likely because I don't know how to properly word my Google search query. I think you are looking for "divisive hierarchical clustering" which is the more commo

Re: [R] R-Package for Recursive Partitioning without Classification or Regression

2017-07-28 Thread Bert Gunter
Tom: Recursive partitioning requires a response variable because splitting criteria are based on node purity/homogeneity (by various criteria) of the responses. So why did you not just search on "clustering" (e.g. at rseek.org)? And in particular, have you looked at the CRAN task view on clusteri

[R] R-Package for Recursive Partitioning without Classification or Regression

2017-07-28 Thread Tom D. Harray
Hello, I have a question related to recursive partitioning, but I cannot find an answer, likely because I don't know how to properly word my Google search query. All recursive partitioning examples, which I can find, are used for either classification or regression trees like library(tree)

Re: [R] R package for scorecard development

2017-06-29 Thread Michael Friendly
Hi I'm sure there are valid reasons for wanting to use a scorecard model, but a more straightforward approach would just be a logistic regression or logistic discriminant analysis. Compared to that, a scorecard model can be considered to be throwing away information by binning the predictors.

Re: [R] R package for scorecard development

2017-06-28 Thread Suzen, Mehmet
I suggest you to have a look at this R document: https://cran.r-project.org/doc/contrib/Sharma-CreditScoring.pdf On 28 June 2017 at 13:26, Nikhil Abhyankar wrote: > Hello all, > > Is there any R package that can develop a scorecard model for a binary > target variable? > > More details: > I want

[R] R package for scorecard development

2017-06-28 Thread Nikhil Abhyankar
Hello all, Is there any R package that can develop a scorecard model for a binary target variable? More details: I want to create a scorecard based on the raw data I have. I have a binary target variable and a few numeric and character input variables. I want to bin the variables and assign a s

Re: [R] R package recommendation - recursively partition data frame, calculate summaries of node data frames, plot and print summaries

2017-05-30 Thread Ismail SEZEN
Hello Ross, > On 30 May 2017, at 14:51, Ross Gayler wrote: > > I am after R package recommendations. > > I have a data frame with ~5 million rows and ~50 columns. (I could do what > I want with a sample of the rows, but ideally i would use all the rows.) Very nice question for a mental gymnast

Re: [R] R package recommendation - recursively partition data frame, calculate summaries of node data frames, plot and print summaries

2017-05-30 Thread Bert Gunter
1. Generally this sort of thing (statistical issues) is OT here. 2. Have you tried googling? "recursive partitioning R" . 3. Have you looked at the CRAN "Machine Laearning" Task View? https://cran.r-project.org/web/views/MachineLearning.html -- Bert Bert Gunter "The trouble with having an ope

[R] R package recommendation - recursively partition data frame, calculate summaries of node data frames, plot and print summaries

2017-05-30 Thread Ross Gayler
I am after R package recommendations. I have a data frame with ~5 million rows and ~50 columns. (I could do what I want with a sample of the rows, but ideally i would use all the rows.) (1) I want to recursively partition the rows of the data frame in a way that I manually specify. That is, I wan

Re: [R] R package

2017-03-23 Thread Ulrik Stervbo
Hi Elahe, maybe the us.cities() in the maps package is what you look for. HTH Ulrik On Thu, 23 Mar 2017 at 11:34 Elahe chalabi via R-help wrote: > Hi all, > > I have a data frame containing serial numbers for US. I also have a column > showing the city in US, now my question is is there a pack

[R] R package

2017-03-23 Thread Elahe chalabi via R-help
Hi all, I have a data frame containing serial numbers for US. I also have a column showing the city in US, now my question is is there a package in R able to get the city in US as input and then return the name of State for that city?! Thanks for any help! Elahe ___

Re: [R] R-package (“SeCuredSurv”)

2016-09-27 Thread Thierry Onkelinx
Dear Anonymous, It's seems like that package never made it to CRAN. You should contact the package author or the author of the reference. Best regards, ir. Thierry Onkelinx Instituut voor natuur- en bosonderzoek / Research Institute for Nature and Forest team Biometrie & Kwaliteitszorg / team Bi

Re: [R] R-package (“SeCuredSurv”)

2016-09-27 Thread Sarah Goslee
The only google hit appears to be that paper, which is a 2014 PhD dissertation, and states that the author will be uploading it on CRAN. Since that hasn't been done, the only thing you can do is try to track down the author and ask. Sarah On Tue, Sep 27, 2016 at 4:45 AM, stud1830153714 wrote: >

[R] R-package (“SeCuredSurv”)

2016-09-27 Thread stud1830153714
To whom it may concern I am MS student of Biostatistics. One of my thesis references is the article" High-Dimensional Variable Selection for Multivariate and Survival Data with Applications to Brain Imaging and Genetic Association Studies. "And in the article it mentions that they use the R-p

Re: [R] R Package installation

2016-08-12 Thread Divakar Reddy
parallel is R's base package and it's already installed with base R. check in below location: /usr/lib64/R/library/ Thanks, Divakar On Fri, Aug 12, 2016 at 3:53 AM, Dayalan, Nithya wrote: > Hi Team, > > We are receiving the below message while updating the package. Please help. > > > install.

Re: [R] R Package installation

2016-08-12 Thread Jeff Newmiller
This may not have anything to do with the OP's problem, but if permissions are an issue then it should be mentioned. One problem that some windows users encounter is thinking they should "Run As" administrator when installing or running R, rather than letting Windows UAE prompt them for privi

Re: [R] R Package installation

2016-08-12 Thread John Dougherty
On Fri, 12 Aug 2016 06:53:03 -0400 "Dayalan, Nithya" wrote: You don't say what OS you are using, though the packages you were trying to obtain are apparently for Windows. You also don't say whether you are using something like R-Studio, or whether you are on a company network behind a firewall.

Re: [R] R Package installation

2016-08-12 Thread David Winsemius
DPS | HCL @ Merck > E-mail: nithya.daya...@merck.com > Tel#+91 44 61053951| Mobile +91 8754232975 > > > -Original Message- > From: Dayalan, Nithya > Sent: Friday, August 12, 2016 10:45 AM > To: 'Jeff Newmiller'; 'r-help@R-project.org'

Re: [R] R Package installation

2016-08-12 Thread David Winsemius
sion 3.2.5) > Thanks & Regards, > Nithya Dayalan > AMS MRL DPS | HCL @ Merck > E-mail: nithya.daya...@merck.com > Tel#+91 44 61053951| Mobile +91 8754232975 > > > -Original Message- > From: Dayalan, Nithya > Sent: Friday, August 12, 2016 10:45

Re: [R] R Package installation

2016-08-12 Thread Dayalan, Nithya
From: David Winsemius [mailto:dwinsem...@comcast.net] Sent: Friday, August 12, 2016 10:51 AM To: Dayalan, Nithya Cc: r-help@R-project.org; Radhakrishan, Balaji Subject: Re: [R] R Package installation > On Aug 12, 2016, at 3:53 AM, Dayalan, Nithya wrote: > > Hi Team, > > We ar

Re: [R] R Package installation

2016-08-12 Thread Dayalan, Nithya
ithya Sent: Friday, August 12, 2016 10:45 AM To: 'Jeff Newmiller'; 'r-help@R-project.org' Cc: Radhakrishan, Balaji Subject: RE: [R] R Package installation Yes Jeff, I tried it with 10 mirrors. Thanks & Regards, Nithya Dayalan AMS MRL DPS | HCL @ Merck E-mail: nithya.daya.

Re: [R] R Package installation

2016-08-12 Thread Dayalan, Nithya
3 AM To: Dayalan, Nithya; 'r-help@R-project.org' Cc: Radhakrishan, Balaji Subject: Re: [R] R Package installation Choose A Different Mirror -- Sent from my phone. Please excuse my brevity. On August 12, 2016 3:53:03 AM PDT, "Dayalan, Nithya" wrote: >Hi Team, > >W

Re: [R] R Package installation

2016-08-12 Thread David Winsemius
l: nithya.daya...@merck.com > Tel#+91 44 61053951| Mobile +91 8754232975 > > > -----Original Message- > From: David Winsemius [mailto:dwinsem...@comcast.net] > Sent: Friday, August 12, 2016 10:51 AM > To: Dayalan, Nithya > Cc: r-help@R-project.org;

Re: [R] R Package installation

2016-08-12 Thread David Winsemius
> On Aug 12, 2016, at 3:53 AM, Dayalan, Nithya wrote: > > Hi Team, > > We are receiving the below message while updating the package. Please help. > >> install.packages("parallel", lib="D:/Program Files/R/R-3.2.5/library") > Warning: unable to access index for repository > https://cran.fhcrc.

Re: [R] R Package installation

2016-08-12 Thread Jeff Newmiller
Choose A Different Mirror -- Sent from my phone. Please excuse my brevity. On August 12, 2016 3:53:03 AM PDT, "Dayalan, Nithya" wrote: >Hi Team, > >We are receiving the below message while updating the package. Please >help. > >> install.packages("parallel", lib="D:/Program >Files/R/R-3.2.5/

[R] R Package installation

2016-08-12 Thread Dayalan, Nithya
Hi Team, We are receiving the below message while updating the package. Please help. > install.packages("parallel", lib="D:/Program Files/R/R-3.2.5/library") Warning: unable to access index for repository https://cran.fhcrc.org/src/contrib: cannot open URL 'https://cran.fhcrc.org/src/contrib/P

[R] R package updating

2016-06-24 Thread deva d
hi all, i notice that the R package available at CRAN is a more recent one compared to what I have. but i failed to update my machine and unfortunately, R does not work any more. can someone kindly suggest what is a way to update the R ver. is there a good way to retain all R files and update i

[R] R-package rmgarch

2016-03-08 Thread Stefanos charalampopoulos
Hi all, The following questions is regarding to the statistical software R. Specifically refers to the rmgarch package for time series analysis. I have a dataset of [1520,34]. I am trying to fit a dcc. I am using multispec because i want to include many univariate (c(spec1,spec2,spec3) etc)models

Re: [R] R package for bootstrapping a mixed-design (between-within) MANOVA

2016-03-01 Thread Bert Gunter
R is a programming LANGUAGE. You can always write your own code (it is not clear exactly how you would bootstrap, as this is not an iid error structure), and there are many online courses and tutorials to help you do so. See here for some suggestions: https://www.rstudio.com/resources/training/onl

[R] R package for bootstrapping a mixed-design (between-within) MANOVA

2016-02-29 Thread Kristina Loderer
Dear all, new to R - I have tried to search different package manuals, but seem to be unable to find what I want...is there an R package that allows me to compute bootstrapped MANOVAs for multivariate analysis containing two factors, one of them being a repeated measures (within) factor, the othe

Re: [R] R package built using newer version of R

2016-01-05 Thread Tyler Auerbeck
t up some sort of profile that would set this suppression, run >> > a dummy command and then unset the suppression. I know this is a >> > workaround, but I just wasn't sure what would be the simpler solution. >> > >> > Let me know what you think or what I may be mi

Re: [R] R package built using newer version of R

2016-01-05 Thread Tyler Auerbeck
t; > >> If that fails (sometimes R gives a version error, package not available > for > >> R version X.X.X), you could try downloading the source package > >> (package.tar.gz) and compile it with running from console (or prompt): > >> > >> R CMD INSTALL packagena

Re: [R] R package built using newer version of R

2016-01-05 Thread David Winsemius
te: > >> If that fails (sometimes R gives a version error, package not available for >> R version X.X.X), you could try downloading the source package >> (package.tar.gz) and compile it with running from console (or prompt): >> >> R CMD INSTALL packagename.tar.g

Re: [R] R package built using newer version of R

2016-01-05 Thread Marc Schwartz
t with running from console (or prompt): >> >> R CMD INSTALL packagename.tar.gz library-location >> >> Regards, >> >> Harrie >> >> -Original Message- >> From: R-help [mailto:r-help-boun...@r-project.org] On Behalf Of Duncan >&

Re: [R] R package built using newer version of R

2016-01-05 Thread Tyler Auerbeck
INSTALL packagename.tar.gz library-location > > Regards, > > Harrie > > -Original Message- > From: R-help [mailto:r-help-boun...@r-project.org] On Behalf Of Duncan > Murdoch > Sent: maandag 4 januari 2016 20:16 > To: Tyler Auerbeck ; r-help@r-project.org > Su

Re: [R] R package built using newer version of R

2016-01-05 Thread Harrie Robins
Message- From: R-help [mailto:r-help-boun...@r-project.org] On Behalf Of Duncan Murdoch Sent: maandag 4 januari 2016 20:16 To: Tyler Auerbeck ; r-help@r-project.org Subject: Re: [R] R package built using newer version of R On 04/01/2016 2:02 PM, Tyler Auerbeck wrote: > We're currently lo

Re: [R] R package built using newer version of R

2016-01-04 Thread Duncan Murdoch
On 04/01/2016 2:02 PM, Tyler Auerbeck wrote: We're currently looking at using the R eclipse plugin StatET as our development environment. Due to certain requirements, we're still using 2.15.1. However a required package of StatET was built using 2.15.3, which results in the following warning: Wa

[R] R package built using newer version of R

2016-01-04 Thread Tyler Auerbeck
We're currently looking at using the R eclipse plugin StatET as our development environment. Due to certain requirements, we're still using 2.15.1. However a required package of StatET was built using 2.15.3, which results in the following warning: Warning message: package 'rj' was built under R v

Re: [R] R package

2016-01-02 Thread Jeff Newmiller
Google turned up [1], but it is old and advertised as alpha. Perhaps someone with a Mac can add more clarity. [1] http://adn.biol.umontreal.ca/~numericalecology/old/R/v4/telecharger.html -- Sent from my phone. Please excuse my brevity. On January 2, 2016 2:30:32 PM PST, Randy Kip Bangert wro

Re: [R] R package

2016-01-02 Thread Jeff Newmiller
Your distinction makes no sense to me. "Package" in the context of R is a set of useful related functions usable within R. There is no "R" package in this sense. "Package" is also sometimes used to refer to installable software. The link I pointed you to has just such an item, specifically fo

Re: [R] R package

2016-01-02 Thread David Winsemius
> On Jan 2, 2016, at 12:24 PM, Jeff Newmiller wrote: > > Of course there is [1], but the fact that it works on a Mac does not change > the fact that R is a programming language. Until you begin the process of > becoming a programmer you won't be able to make much use of R regardless of > whic

Re: [R] R package

2016-01-02 Thread Jeff Newmiller
Of course there is [1], but the fact that it works on a Mac does not change the fact that R is a programming language. Until you begin the process of becoming a programmer you won't be able to make much use of R regardless of which computer or operating system you run it on. Fortunately such a t

[R] R package

2016-01-02 Thread Randy Kip Bangert
I really like the R package and find it extremely useful. I also find the R project impossible to use as I am not a programmer. Is there a version of the R package that will run on OS X? _ Randy Bangert Cortez, CO 81321 Northern Arizona Universi

[R] R: Package plm (pvcm) "within" and lm

2015-11-14 Thread Malcolm MISTRY
Dear all, I have a doubt on a fixed-effects specification I am trying to run on my large "balanced" panel data with approx 15,000 IDs (n), 33 years (t). I have used R packages lfe and plm and am aware of methods in both packages for following specifications: (a) Individual FE (ID) (b) Twoways FE

[R] R package related to solving calibration transfer problem

2015-10-18 Thread islah na
Hi, I'm new to R (and also chemometrics). I have problem using same calibration model on spectrums obtained from two spectrometers of same brand. There's little different in the wavelength, less than 1 nm though and also different in their intensity level. What i understand, this problem is a calib

Re: [R] R package with Fortran module on Windows? undefined reference to `__stack_chk_fail'

2015-07-27 Thread Ignacio Martinez
:( I sent this to R-package... I hope people are not hating me for spamming the lists... I will email R-devel Thanks! On Mon, Jul 27, 2015 at 1:55 PM peter dalgaard wrote: > You went through the trouble to chastise a beginner and failed to spot the > difference between R-packages and R-package-

Re: [R] R package with Fortran module on Windows? undefined reference to `__stack_chk_fail'

2015-07-27 Thread peter dalgaard
You went through the trouble to chastise a beginner and failed to spot the difference between R-packages and R-package-devel? (I think R-devel is better for now. R-package-devel is more for people trying to make CRAN happy.) -pd PS: The by-hand example suggests that there is a 32/64 bit mixup.

Re: [R] R package with Fortran module on Windows? undefined reference to `__stack_chk_fail'

2015-07-27 Thread Jeff Newmiller
You went to all that trouble to find a mailing list to ask your question on and failed to find R-packages or R-devel? --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#.

[R] R package with Fortran module on Windows? undefined reference to `__stack_chk_fail'

2015-07-27 Thread Ignacio Martinez
Hi, I created a R library that uses a Fortran module. Everything works like a charm on linux. Now I'm trying to make it work on Windows. I cloned my git repository on a windows computer, and when I press the build and reload button on Rstudio I get these errors

[R] R-package TDA- RipsDiag issues

2015-07-15 Thread lstat
Hi there, I was hoping you could help me out with the following: - I am trying to compute the diagram of a Rips filtration built on top of a point cloud. I've gone through several tutorials, and I always get the same answer as the tutorial. Let's say I am inputting an n by d matrix of coordinates

Re: [R] R package creation: Confused about how to handle text data

2015-01-12 Thread Marine Rohmer
Hi Uwe and Hadley, Thank you a lot for your answer. The ./inst/extdata folder seems to work fine, accessing my text files in this way : myFile=system.file("extdata", "myFile.csv", package="MyPackage") I've read the Writing R Extension so many times without understanding well the 1.1.6 section,

Re: [R] R package creation: Confused about how to handle text data

2015-01-10 Thread Uwe Ligges
You do not want to access these data files by standard mechnisms, and that's what the ./data folder is good for. See Writing R Extensions, it suggests to use the ./extdata directory in your case, then the data is unchanged and you can access those data by your own functions. Best, Uwe Ligges

[R] R package creation: Confused about how to handle text data

2015-01-09 Thread Marine Rohmer
Dear R team, I am currently creating my first R package and I am getting confused with the way to handle text data. I've well understood that datasets have to be placed in the ./data subdirectory, saved into one of the .rda, .txt or .csv format, and then can be loaded with the data() function.

Re: [R] R Package for Text Manipulation

2014-08-09 Thread David Winsemius
On Aug 9, 2014, at 5:15 AM, Omar André Gonzáles Díaz wrote: > Hi all, > > I want to know, where i can find a package to simulate the functions > "Search and Replace and "Find Words that contain - replace them with...", > that we can use in EXCEL. > > I've look in other places and they say: "Re

Re: [R] R Package for Text Manipulation

2014-08-09 Thread Gabor Grothendieck
On Sat, Aug 9, 2014 at 8:15 AM, Omar André Gonzáles Díaz wrote: > Hi all, > > I want to know, where i can find a package to simulate the functions > "Search and Replace and "Find Words that contain - replace them with...", > that we can use in EXCEL. > > I've look in other places and they say: "R

[R] R Package for Text Manipulation

2014-08-09 Thread Omar André Gonzáles Díaz
Hi all, I want to know, where i can find a package to simulate the functions "Search and Replace and "Find Words that contain - replace them with...", that we can use in EXCEL. I've look in other places and they say: "Reshape2" by Hadley Wickham. How ever, i've investigated it and its not exactl

Re: [R] R Package making error

2014-05-05 Thread Sarah Goslee
While I don't particularly like the idea of a package automatically making changes to the system, you can use installed.packages() to see which of your needed packages are already available, and only install the ones that are missing. Better would be to put the whole list in Depends, and let R m

[R] R Package making error

2014-05-05 Thread Ashis Deb
Hi all , I have a GUI package function like below , trader<-function() { install.packages("Rgtk2") install.packages("cluster") install.packages("gWidgets") install.packages("gWidgetsRGtk2") install.packages("scales") install.packages("RGtk2Extras") install.packages("Fuzz

Re: [R] R- package for Parametric Survival Analysis with Left-censored data

2013-11-27 Thread Göran Broström
On 11/20/2013 08:17 AM, peter dalgaard wrote: On 20 Nov 2013, at 04:15 , David Winsemius wrote: On Nov 19, 2013, at 5:30 PM, Vinod Mishra wrote: Dear All, I am new to R. Can someone please direct me to an R package using which I can estimate a Parametric Survival Analysis model with Lef

Re: [R] R- package for Parametric Survival Analysis with Left-censored data

2013-11-19 Thread peter dalgaard
On 20 Nov 2013, at 04:15 , David Winsemius wrote: > > On Nov 19, 2013, at 5:30 PM, Vinod Mishra wrote: > >> Dear All, >> >> I am new to R. Can someone please direct me to an R package using which I >> can estimate a Parametric Survival Analysis model with Left-censored >> (delayed entry) da

Re: [R] R- package for Parametric Survival Analysis with Left-censored data

2013-11-19 Thread David Winsemius
On Nov 19, 2013, at 5:30 PM, Vinod Mishra wrote: > Dear All, > > I am new to R. Can someone please direct me to an R package using which I can > estimate a Parametric Survival Analysis model with Left-censored (delayed > entry) data in it. > > I recently received reviewers comment on my subm

[R] R- package for Parametric Survival Analysis with Left-censored data

2013-11-19 Thread Vinod Mishra
Dear All, I am new to R. Can someone please direct me to an R package using which I can estimate a Parametric Survival Analysis model with Left-censored (delayed entry) data in it. I recently received reviewers comment on my submitted article, where the reviewer suggested that only R has capa

Re: [R] r package to solve for Nash equilibrium

2013-11-13 Thread Rolf Turner
On 11/12/13 02:49, Dereje Fentie wrote: Is there an r package out there that solves for pure strategy* Nash equilibrium of a two-person game*? A search for Nash equilibrium in r provides a link to the *GNE* package which solves for the Generalized Nash equilibrium. But what I would like to solve

[R] r package to solve for Nash equilibrium

2013-11-11 Thread Dereje Fentie
Is there an r package out there that solves for pure strategy* Nash equilibrium of a two-person game*? A search for Nash equilibrium in r provides a link to the *GNE* package which solves for the Generalized Nash equilibrium. But what I would like to solve is a pure strategy Nash equilibrium.

Re: [R] R Package License

2013-07-17 Thread Marc Schwartz
On Jul 17, 2013, at 10:56 AM, "Li, Yan" wrote: > HI Helpers, > > How could we use R and R packages licensed under GPL into commercial > products? Is it allowed to load a library and get the results from it and > using the results for commercial use? Thank you so much! > > Regards, > Yan For

[R] R Package License

2013-07-17 Thread Li, Yan
HI Helpers, How could we use R and R packages licensed under GPL into commercial products? Is it allowed to load a library and get the results from it and using the results for commercial use? Thank you so much! Regards, Yan [[alternative HTML version deleted]] ___

Re: [R] R package for bootstrapping (comparing two quadratic regression models)

2013-05-06 Thread Elaine Kuo
Thanks Jean. Y1 = observed value Y2= estimated value Elaine On Mon, May 6, 2013 at 9:22 PM, Adams, Jean wrote: > Elaine, > > I suggest that you consult with a statistician to see if it even makes > sense to compare the two models you describe. The first model makes sense > to me, the second o

Re: [R] R package for bootstrapping (comparing two quadratic regression models)

2013-05-06 Thread Adams, Jean
Elaine, I suggest that you consult with a statistician to see if it even makes sense to compare the two models you describe. The first model makes sense to me, the second one does not. Isn't y2 in the second equation equal to the estimated y1 from the first equation? You need to talk with someo

[R] R package for bootstrapping (comparing two quadratic regression models)

2013-05-03 Thread Elaine Kuo
Hello , I want to compare two quadratic regression models with non-parametric bootstrap. However, I do not know which R package can serve the purpose, such as boot, rms, or bootstrap, DeltaR. Please kindly advise and thank you. Elaine The two quadratic regression models are y1=a1x^2+b1x+c1 y1=

[R] R package for normalizing microarray with few samples

2013-01-27 Thread Gundala Viswanath
I have only *two* datasets from normal and cancer samples. CancerNormal -- mRNA1 3049 mRNA2 199200 ... ... ... mRNA1000 1340 Each samples contain several thousan mRNA microarray express

Re: [R] R Package for Longitudinal Binary Response Data?

2012-10-21 Thread Frank Harrell
I didn't get any responses to this question so just trying one more time ... -Frank Frank Harrell wrote > The bild package appears to be an excellent package for serial binary > responses. But it is for discrete time. I would like to specify a smooth > function of time for the odds ratio connec

[R] R Package for Longitudinal Binary Response Data?

2012-10-17 Thread Frank Harrell
The bild package appears to be an excellent package for serial binary responses. But it is for discrete time. I would like to specify a smooth function of time for the odds ratio connection of the current response Y with binary responses measured at earlier times, or at least a first-order Markov

Re: [R] R package for dashboard

2012-09-19 Thread arun
HI, May be "brew" package helps you. You can also check this link (http://learnr.wordpress.com/2009/04/09/ggplot2-sales-dashboard/). A.K. - Original Message - From: XINLI LI To: r-help Cc: Sent: Wednesday, September 19, 2012 11:48 AM Subject: [R] R package for dashb

Re: [R] R package for dashboard

2012-09-19 Thread Bhupendrasinh Thakre
One of the package which I know of is rgooglevis. However there should be some more in the same line. Copying it to the list so someone else also chime in for answer. Best Regards, Bhupendrasinh Thakre Sent from my iPhone On Sep 19, 2012, at 11:52 AM, XINLI LI wrote: > Thank you very much

Re: [R] R package for dashboard

2012-09-19 Thread Bhupendrasinh Thakre
Depends on your requirement . Who is going to use it. Do you want something like running in browser or something like excel or somewhat different like Tcl tk. Best Regards, Bhupendrasinh Thakre Sent from my iPhone On Sep 19, 2012, at 10:48 AM, XINLI LI wrote: > What package can be used to pr

[R] R package for dashboard

2012-09-19 Thread XINLI LI
What package can be used to produce dashboard in R? Thanks and Regards, Xin __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide comme

[R] R package fields: Thin-plate splines question

2012-08-31 Thread Rebecca Clark
Greetings, R helpers, I have been using the Tps() function in the fields package to model response surfaces for some dietary research in crickets. Overall, I have *three* independent variables of interest, two continuous variables ("protein" and "carbohydrate") and one categorical variable (cr

Re: [R] R-package "FunctSNP"

2012-08-21 Thread Steve Friedman
Did you download the zip file to your computer? Next install from zip file. On Aug 21, 2012 9:06 AM, wrote: > Hy everyone, > > I am new in R so I will pose a simple question that I cannot find out > reading tutorials. > I would like to install the R-package "FunctSNP" by file.zip because it´s >

[R] R-package "FunctSNP"

2012-08-21 Thread ltrotta
Hy everyone, I am new in R so I will pose a simple question that I cannot find out reading tutorials. I would like to install the R-package "FunctSNP" by file.zip because it´s in the archive (http://ftp.sunet.se/pub/lang/CRAN/src/contrib/Archive/FunctSNP/) but It doesn´t work, I think some

Re: [R] r-package RDCOMClient

2012-04-29 Thread Robert Baer
Saturday, April 28, 2012 2:01 PM To: r-help@r-project.org Subject: Re: [R] r-package RDCOMClient Hi, I am new to R. I was trying to use RDCOMClient package to access com object based applications within R. This has been working fine for a while. I have identical set up on two PCs (R-2.1.10

Re: [R] r-package RDCOMClient

2012-04-28 Thread lm
Hi, I am new to R. I was trying to use RDCOMClient package to access com object based applications within R. This has been working fine for a while. I have identical set up on two PCs (R-2.1.10 running on XP both on network so same profile). Recently while installing a new package, I had to upgrade

[R] R package to efficiently create polyline shape file

2012-03-18 Thread yeheng...@gmail.com
I need to convert dbf/csv data to an ESRI shape file consisting of 200,000 polylines in R. I used the package "shapefiles" that can create small shape files. I found it takes too much time for create 200,000 polylines. I checked the source codes and found R loop is used. I guess it may be the r

Re: [R] R package documentation

2012-02-24 Thread Ista Zahn
Hi, On Friday, February 24, 2012 02:52:32 AM Matyas Sustik wrote: > Hi All, > > I am asking for some clarification on R package documentation. > The Writing R extension manual did not make this clear for me > the following: > > 1. How to document a dataset? I know the file format from the > doc

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