hello Michael,I specified each column like this screenshot:(A.C1 means
experiment A and first control,A.T3 means experiment A and third treatment
) I have two transposed file,one for coding and one for lncoding.
On Wednesday, December 7, 2016 6:11 PM, Michael Dewey
wrote:
I
If I understand this correctly you are choosing all the rows from each
of cod and lnc which contain .c (ie any character followed by a C) and
deleting the first column from each of cod and lnc. You then correlate
them so that you get the correlation between corresponding columns of
each. Since
Hi All,I have 11 human RNA-seq data (control/treatment),The effect of various
drugs on various cancers,I want to calculate the genes-lncRna correlations for
all tumors considered together for network,I did differential expression
analysis and prepared normalized values (rpkm) of coding and lncod
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