Duncan Murdoch wrote:
> R is designed to be flexible, and to let people change its behaviour.
> Using that flexibility is what all users should do. Improving the user
> experience is what front-end writers should do. I don't find it
> inadvisable at all.
Well, that's a big whopping U-turn.
Abb
Hi Duncan,
What you say is entirely sensible.
Yes, it's primarily the silent part that seems problematic to me.
Messages about masking are uninteresting until one encounters a problem,
and then they may provide an important clue to the source of the problem.
As to this specific case: It's no
Hi John.
I suspect most good front ends do similar things. For example, on
MacOS, R.app messes up "history()". I've never used ESS, but I imagine
one could find examples where it acts differently than base R: isn't
that the point?
One hopes all differences are improvements, but sometimes
Dear Duncan,
On 2020-08-17 9:03 a.m., Duncan Murdoch wrote:
On 17/08/2020 7:54 a.m., Ivan Calandra wrote:
Dear useRs,
Following the recent activity on the list, I have been made aware of
this discussion:
https://stat.ethz.ch/pipermail/r-help/2020-May/466788.html
I used to install all packages
Thank you Duncan for the very detailed and clear answer!
Best,
Ivan
--
Dr. Ivan Calandra
TraCEr, laboratory for Traceology and Controlled Experiments
MONREPOS Archaeological Research Centre and
Museum for Human Behavioural Evolution
Schloss Monrepos
56567 Neuwied, Germany
+49 (0) 2631 9772-243
ht
On 17/08/2020 7:54 a.m., Ivan Calandra wrote:
Dear useRs,
Following the recent activity on the list, I have been made aware of
this discussion:
https://stat.ethz.ch/pipermail/r-help/2020-May/466788.html
I used to install all packages in R, but for simplicity (I use RStudio
for all purposes), I
Dear useRs,
Following the recent activity on the list, I have been made aware of
this discussion:
https://stat.ethz.ch/pipermail/r-help/2020-May/466788.html
I used to install all packages in R, but for simplicity (I use RStudio
for all purposes), I now do it in RStudio. Now I am left wondering
wh
First post, please excuse any ignorance.
install.packages() seems to only respect install.packages(lib=) for
the specified package (in the below case {purrr}) and will ignore any
dependencies ({magrittr}, {rlang}) if they are found in any of the
directories in .libPaths() (e.g. R_LIBS). The reaso
Hi,
I'm trying to install the package 'nloptr' and am getting the error
configure: error: in `/scratch/tmp/RtmpJ2Y1xA/R.INSTALL3b35583b483/nloptr':
configure: error: C++ preprocessor "/lib/cpp" fails sanity check
See `config.log' for more details
I would like to check 'config.log', but the
Hi Rolf,
Looks like it is indeed the Halloween ghosts!
I did what you said and it worked. Thank you!
Do you know how the .RData might have gotten corrupted?
Thanks again,
Emma
Rolf Turner 於 2015年10月29日 星期四寫道：
>
>
> Have you tried this after starting R in a "clean" workspace?
> Or perhaps after
I turned the startup script back on and tried installing stringr. It went
smoothly. Seems like the ghosts are gone. No clue how the corruption
happened though.
Thanks to both of you! Happy Halloween :D
Best,
Emma
Boris Steipe 於 2015年10月30日 星期五寫道：
> Emma - do installations still work after you
Emma - do installations still work after you switch the startup script back on
that I suggested you comment out? I'm specifically asking about loading
plot3D...
As far as I'm concerned "it worked" would mean: you can load plot3D and
magrittr through the startup script and then R is just fine an
Have you tried this after starting R in a "clean" workspace?
Or perhaps after starting R --vanilla?
It sounds to me like something is corrupted in your install.packages()
function --- or possible somewhere else --- which could be induced by
having some ghosts lurking about in .RData.
(After
We are seeing the following problem when trying to install magrittr on Ubuntu
14.04
install.packages("magrittr")
Installing package into ‘/home/ehsueh/R/x86_64-pc-linux-gnu-library/3.0’
(as ‘lib’ is unspecified)
--- Please select a CRAN mirror for use in this session ---
trying URL 'http://lib
It seems that installed.packages has changed behavior in 3.2.0.
We have a local package repository containing only binaries of packages (for
Windows).
Since 3.2.0, using install.packages for a package form such a repository does
not work any more.
The solution is to add the parameter type=“binar
7;help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> install.packages('animation')
Warning in install.packages("animation") :
'lib = "/share/apps/r/3.1.0/lib64/R/library"' is n
On 17/12/2013 22:02, Duncan Murdoch wrote:
On 13-12-17 1:18 PM, Prof Brian Ripley wrote:
The obvious idea to set up a local repository works. It takes 5 mins at
most.
That makes a lot of sense to do on Unix-alikes, but less so on Windows.
A local repository of tarballs needs to be in src/co
On 13-12-17 1:18 PM, Prof Brian Ripley wrote:
The obvious idea to set up a local repository works. It takes 5 mins at
most.
That makes a lot of sense to do on Unix-alikes, but less so on Windows.
A local repository of tarballs needs to be in src/contrib below the
URL of the repository. On
The obvious idea to set up a local repository works. It takes 5 mins at
most.
On 17/12/2013 18:08, Duncan Murdoch wrote:
So apparently not as simple as I thought it would be. So I'll tell you
what I actually do:
I have a number of packages under development, some on CRAN, some not. I
also wo
So apparently not as simple as I thought it would be. So I'll tell you
what I actually do:
I have a number of packages under development, some on CRAN, some not.
I also work in multiple builds of R pretty frequently, so I like to
install all my packages and commonly used ones from other peop
> On Tue, Dec 17, 2013 at 11:36 AM, Duncan Murdoch
> wrote:
[...]
>> I imagine some package has a function that does what you want, but I don't
>> know it. It wouldn't be hard to put one together as follows:
>>
>> 1. install your package without its dependencies.
This does not seem to work if t
Thanks!
Btw, install() from the devtools package can do this in theory, but
not in practice, because of a bug (it silently ignores "Suggests").
This is fixed in their github version.
Just to add something useful here.
Gabor
On Tue, Dec 17, 2013 at 11:36 AM, Duncan Murdoch
wrote:
> On 17/12/201
On 17/12/2013 11:26 AM, Gábor Csárdi wrote:
Dear all,
I am trying to install a private package, with its dependencies. However, both
install.packages("sand_1.0.tar.gz", dependencies=TRUE, repos=NULL,
type="source")
and
install.packages("sand_1.0.tar.gz", dependencies="Suggests",
repos=NULL, t
Answer to myself. 'dependencies' are
Not used if ‘repos = NULL’.
Sorry for the noise.
Gabor
On Tue, Dec 17, 2013 at 11:26 AM, Gábor Csárdi wrote:
> Dear all,
>
> I am trying to install a private package, with its dependencies. However, both
>
> install.packages("sand_1.0.tar.gz", dependencies=
Dear all,
I am trying to install a private package, with its dependencies. However, both
install.packages("sand_1.0.tar.gz", dependencies=TRUE, repos=NULL,
type="source")
and
install.packages("sand_1.0.tar.gz", dependencies="Suggests",
repos=NULL, type="source")
fail to install suggested packa
Hi,
The R-admin manual says:
"If installing packages on a Unix-alike to be used by other users,
ensure that the system umask is set to give sufficient permissions
(see also Sys.umask in R). (To a large extent this is unnecessary in
recent versions of R, which install packages as if umask = 022.)"
I have the same problem as Daniel Westphal, packages are always installed with
umask 022, I'd like 002.
Any solution so far?
Thank you.
Francois
[[alternative HTML version deleted]]
__
R-help@r-project.org mailing list
https://stat.ethz.ch/m
You can look for different versions of that package and try manually
installing the lower version.
On Fri, Sep 28, 2012 at 11:25 PM, Uwe Ligges <
lig...@statistik.tu-dortmund.de> wrote:
>
>
> On 28.09.2012 00:32, Duncan Murdoch wrote:
>
>> On 12-09-27 2:53 PM, Anju R wrote:
>>
>>> Sometimes when
On 28.09.2012 00:32, Duncan Murdoch wrote:
On 12-09-27 2:53 PM, Anju R wrote:
Sometimes when I try to install certain packages I get a warning message.
For example, I tried to install the package "Imtest" on windows R version
2.15.1 and got the following message:
Warning message:
package ‘Imt
On 12-09-27 2:53 PM, Anju R wrote:
Sometimes when I try to install certain packages I get a warning message.
For example, I tried to install the package "Imtest" on windows R version
2.15.1 and got the following message:
Warning message:
package ‘Imtest’ is not available (for R version 2.15.1)
Sometimes when I try to install certain packages I get a warning message.
For example, I tried to install the package "Imtest" on windows R version
2.15.1 and got the following message:
Warning message:
package Imtest is not available (for R version 2.15.1)
How can I install the above package?
Hello,
I've been trying to setup a site library that allows the users to manage
the R packages themselves, but am having an issue with permissions. As
seen below, when installing a package using install.packages, the umask
used is always 022. Instead, I would like it to be 002, allowing any user
t
roject.org
Subject: Re: [R] install.packages
Hi,
On Mon, Jul 9, 2012 at 2:30 PM, Hui Du wrote:
>
> Hi All,
>
> I have two questions regarding install.packages().
>
> Q1: may I run it in non-interactive mode, which means just install the
> packages I want rather than letting me to
Hi,
On Mon, Jul 9, 2012 at 2:30 PM, Hui Du wrote:
>
> Hi All,
>
> I have two questions regarding install.packages().
>
> Q1: may I run it in non-interactive mode, which means just install the
> packages I want rather than letting me to choose which mirror etc?
Sure. If you read ?install.package
Hi All,
I have two questions regarding install.packages().
Q1: may I run it in non-interactive mode, which means just install the packages
I want rather than letting me to choose which mirror etc?
Q2: I ran a R code in batch mode, for example, R CMD BATCH a.r
In a.r, I have some statements li
This is something missing from your (unstated) Linux installation.
curl-config is part of the original libcurl sources, but Linux
distributors tend to separte it out. *How* they do so is
non-standard:
Fedora and other RPM-based distributions tend to use libcurl-devel
Debian and related tend
On Sat, Nov 5, 2011 at 2:47 PM, eric wrote:
> I'm trying to install the rdatamarket package. I did an
> install.packages('rdatamarket') command but got an error about half way
> through the install as follows:
>
> * installing *source* package ‘RCurl’ ...
> checking for curl-config... no
> Cannot
I'm trying to install the rdatamarket package. I did an
install.packages('rdatamarket') command but got an error about half way
through the install as follows:
* installing *source* package ‘RCurl’ ...
checking for curl-config... no
Cannot find curl-config
ERROR: configuration failed for package ‘
Groan! Thanks. New baby mean no sleep. I'll make some more coffee.
Allan
On 15/03/11 08:18, Jim Lemon wrote:
On 03/15/2011 06:57 PM, Allan Engelhardt wrote:
I'm sure I used to be able to do
...
unused argument(s) (dependecies = c("Depends", "Imports", "LinkingTo",
check the spelling.
Jim
On 03/15/2011 06:57 PM, Allan Engelhardt wrote:
I'm sure I used to be able to do
...
unused argument(s) (dependecies = c("Depends", "Imports", "LinkingTo",
check the spelling.
Jim
__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/lis
I'm sure I used to be able to do
my.dependencies<- c("Depends", "Imports", "LinkingTo", "Suggests", "Enhances")
install.packages("animation", lib = Sys.getenv("R_LIBS_USER"), dependecies =
my.dependencies)
but now I get
Error in download.file(url, destfile, method, mode = "wb", ...) :
unused
Hi Geoff,
What is your platform and R version? I cannot replicate on either:
R version 2.12.1 (2010-12-16)
Platform: i386-pc-mingw32/i386 (32-bit)
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] reshape_0.8.4 plyr_1.4
load
I'm not sure where I should send this, I don't have a bugzilla account,
but ... it concerns an interaction between library(reshape) and
install.packages() ...
My current .Rprofile includes: library(reshape)
After which install.packages fails ... e.g.,
> install.packages("quantreg")
Warning in in
On 27.01.2011 11:16, Temel Canpolat wrote:
Hi,
I need to install "lmtest package".I have tried to several times to install
packages however I could not. Can anyone help?
Best regards
install.packages ()
--- Please select a CRAN mirror for use in this session ---
Warning: unable to access
Hi,
I need to install "lmtest package".I have tried to several times to install
packages however I could not. Can anyone help?
Best regards
install.packages ()
--- Please select a CRAN mirror for use in this session ---
Warning: unable to access index for repository
http://cran.cict.fr/bin/wind
I've just tentatively put code to fix this in place in R-devel. By
default it is not enabled, because if it goes wrong it could really mess
things up. To enable it, set
options(install.lock=TRUE)
before installing or updating binary packages in Windows. It will slow
down all installs, so i
This sounds like a good solution for the case I described in my first
email.
Thanks a lot!
Jon
On 12/20/2010 4:05 PM, Duncan Murdoch wrote:
On 20/12/2010 9:29 AM, Duncan Murdoch wrote:
On 20/12/2010 9:26 AM, Uwe Ligges wrote:
>
> On 20.12.2010 15:19, Duncan Murdoch wrote:
> > On 20/12/2010
On 20/12/2010 9:29 AM, Duncan Murdoch wrote:
On 20/12/2010 9:26 AM, Uwe Ligges wrote:
>
> On 20.12.2010 15:19, Duncan Murdoch wrote:
> > On 20/12/2010 9:03 AM, Jon Olav Skoien wrote:
[ lots deleted ]
> >> Yes, I had it open. In this case it was intentional to give a
> >> reproducibl
On 20/12/2010 9:26 AM, Uwe Ligges wrote:
On 20.12.2010 15:19, Duncan Murdoch wrote:
> On 20/12/2010 9:03 AM, Jon Olav Skoien wrote:
>> On 12/20/2010 1:43 PM, Duncan Murdoch wrote:
>> > Jon Olav Skoien wrote:
>> >> On 12/17/2010 6:22 PM, Duncan Murdoch wrote:
>> >>> On 17/12/2010 11:13 AM
On 20.12.2010 15:19, Duncan Murdoch wrote:
On 20/12/2010 9:03 AM, Jon Olav Skoien wrote:
On 12/20/2010 1:43 PM, Duncan Murdoch wrote:
> Jon Olav Skoien wrote:
>> On 12/17/2010 6:22 PM, Duncan Murdoch wrote:
>>> On 17/12/2010 11:13 AM, Jon Olav Skoien wrote:
Dear list,
(R 2.12.0,
On 20/12/2010 9:03 AM, Jon Olav Skoien wrote:
On 12/20/2010 1:43 PM, Duncan Murdoch wrote:
> Jon Olav Skoien wrote:
>> On 12/17/2010 6:22 PM, Duncan Murdoch wrote:
>>> On 17/12/2010 11:13 AM, Jon Olav Skoien wrote:
Dear list,
(R 2.12.0, Windows 7, 64bit)
I recently
On 12/20/2010 1:30 PM, Uwe Ligges wrote:
On 20.12.2010 09:41, Jon Olav Skoien wrote:
On 12/17/2010 6:22 PM, Duncan Murdoch wrote:
On 17/12/2010 11:13 AM, Jon Olav Skoien wrote:
Dear list,
(R 2.12.0, Windows 7, 64bit)
I recently tried to install a new package ("spacetime"), that
depends on
On 12/20/2010 1:43 PM, Duncan Murdoch wrote:
Jon Olav Skoien wrote:
On 12/17/2010 6:22 PM, Duncan Murdoch wrote:
On 17/12/2010 11:13 AM, Jon Olav Skoien wrote:
Dear list,
(R 2.12.0, Windows 7, 64bit)
I recently tried to install a new package ("spacetime"), that
depends on
"sp" among others
Jon Olav Skoien wrote:
On 12/17/2010 6:22 PM, Duncan Murdoch wrote:
On 17/12/2010 11:13 AM, Jon Olav Skoien wrote:
Dear list,
(R 2.12.0, Windows 7, 64bit)
I recently tried to install a new package ("spacetime"), that depends on
"sp" among others. I already had the last one installed, but ther
On 20.12.2010 09:41, Jon Olav Skoien wrote:
On 12/17/2010 6:22 PM, Duncan Murdoch wrote:
On 17/12/2010 11:13 AM, Jon Olav Skoien wrote:
Dear list,
(R 2.12.0, Windows 7, 64bit)
I recently tried to install a new package ("spacetime"), that depends on
"sp" among others. I already had the last
On 12/17/2010 6:22 PM, Duncan Murdoch wrote:
On 17/12/2010 11:13 AM, Jon Olav Skoien wrote:
Dear list,
(R 2.12.0, Windows 7, 64bit)
I recently tried to install a new package ("spacetime"), that depends on
"sp" among others. I already had the last one installed, but there was
probably a newer v
On 17/12/2010 11:13 AM, Jon Olav Skoien wrote:
Dear list,
(R 2.12.0, Windows 7, 64bit)
I recently tried to install a new package ("spacetime"), that depends on
"sp" among others. I already had the last one installed, but there was
probably a newer version on CRAN, so the command
> install.pa
Dear list,
(R 2.12.0, Windows 7, 64bit)
I recently tried to install a new package ("spacetime"), that depends on
"sp" among others. I already had the last one installed, but there was
probably a newer version on CRAN, so the command
> install.packages("spacetime")
also gave me:
also installin
I do not know, but perhaps things will resolve if you use a not that
ancient version of R
Uwe Ligges
On 13.05.2010 20:44, Trojan wrote:
Hi all!
I am trying to install package - GenABEL in a Linux (RedHat) environment
using R 2.6.2.
The CRAN Mirror starts up, I select the site, but I end
Hi all!
I am trying to install package - GenABEL in a Linux (RedHat) environment
using R 2.6.2.
The CRAN Mirror starts up, I select the site, but I end up with the
following error:
**
Warning: unable to access index for repository
Dear listeRs,
I am trying to install a package from the command line, using
install.packages(). Specifying all the parameters, I simply get this error:
> r <- getOption("repos")
> install.packages("rJava", dependencies=T, repos=r, lib="/home/adi/myRlib")
Error: subscript out of bounds
Additio
61 matches
Mail list logo
