[R] (no subject)

2013-10-02 Thread Joe Byers
I am trying to get rJava to load the htmlunit java package (http://htmlunit.sourceforge.net/). rJava does not seem to be able to load and find the class in this package. This issue is the same on Windows 7 and Fedora 17 computers. rJava will load and init because I can see java.util.*

[R] (no subject)

2013-09-19 Thread tony toca
Dear R sages, I used the function rbind to combine a matrix (M) and a vector (Fert) to get a new matrix (A). This was fine. The issue is however, that the new matrix A has as its row names the name of the vector Fert, even though I set teh new vector A to have dimnames=NULL. See short code below

Re: [R] (no subject)

2013-09-19 Thread arun
PM Subject: Re: [R] (no subject) Hi, You can either use: A-as.matrix(rbind(M,Fert)) dimnames(A)- list(NULL,NULL)  A # [,1] [,2] [,3] #[1,]  0.3  0.0    0 #[2,]  0.0  0.5    0 #[3,]  0.0  1.0    5 #or matrix(rbind(M,Fert),3,3) A.K.   - Original Message - From: tony toca meddee1

Re: [R] (no subject)

2013-09-19 Thread arun
-project.org Cc: Sent: Thursday, September 19, 2013 8:39 AM Subject: [R] (no subject) Dear R sages, I used the function rbind to combine a matrix (M) and a vector (Fert) to get a new matrix (A). This was fine. The issue is however, that the new matrix A has as its row names the name of the vector Fert

Re: [R] (no subject)

2013-09-19 Thread Richard Kwock
Hi Tony, The dimnames parameter is only in the matrix() function, not in the as.matrix() function. #So you can do: A - matrix(rbind(Fert,M), nrow = nrow(rbind(Fert,M))) A #This for example will allow you to name your row and colums. B - matrix(rbind(Fert,M), nrow = nrow(rbind(Fert,M)), dimnames

Re: [R] (no subject)

2013-09-19 Thread tony toca
Many thanks, guys. Tony On Thu, Sep 19, 2013 at 11:28 PM, Richard Kwock richardkw...@gmail.comwrote: Hi Tony, The dimnames parameter is only in the matrix() function, not in the as.matrix() function. #So you can do: A - matrix(rbind(Fert,M), nrow = nrow(rbind(Fert,M))) A #This for

Re: [R] (no subject)

2013-09-18 Thread John Kane
http://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example John Kane Kingston ON Canada -Original Message- From: algara...@gmail.com Sent: Wed, 18 Sep 2013 10:06:23 +0800 To: r-help@r-project.org Subject: [R] (no subject) Good morning, I am

[R] (no subject)

2013-09-17 Thread alexis garatti
Good morning, I am an economist. I try to build a strategic - tactical portfolio based on my forecasts on different assets. I would want to use the BLCOP package. The strategic portfolio would be based on one-year expectation on the return of each asset The tactical portfolio, with a monthly

[R] (no subject)

2013-09-11 Thread eliza botto
Now?dput(gg) list(structure(list(coefficients = structure(c(1, 0.0747202722085956, 0.359646782818708, 0.298384925903065, -0.443967849195675), .Names = c(x0, x, xx, y, yy)), residuals = structure(c(-0.302776084510551, 0.183247980798144, -0.337231904223223, 0.199348794823859, 0.290269994519382,

Re: [R] (no subject)

2013-09-11 Thread PIKAL Petr
Hi By HTML posting dput is scrambled and impossible to use. Petr -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of eliza botto Sent: Wednesday, September 11, 2013 4:44 PM To: r-help@r-project.org Subject: [R] (no subject

Re: [R] (no subject)

2013-08-30 Thread Uwe Ligges
On 30.08.2013 15:27, Joana Costa wrote: good afternoon, I´m writting because I´m having some problems with R installation. I would like to install R essentials with spss Version 20 but I can´t find wher in Cran site I can do the dowload speciffically of Essentials. Can you help me? I do not

Re: [R] (no subject)

2013-08-30 Thread John Kane
/ Good luck. Oh and R is much nicer than SPSS. Come join us. John Kane Kingston ON Canada -Original Message- From: joanasco...@hotmail.com Sent: Fri, 30 Aug 2013 14:27:37 +0100 To: r-help@r-project.org Subject: [R] (no subject) good afternoon, I4m writting because I4m having some

[R] (no subject)

2013-08-30 Thread Joana Costa
good afternoon, I´m writting because I´m having some problems with R installation. I would like to install R essentials with spss Version 20 but I can´t find wher in Cran site I can do the dowload speciffically of Essentials. Can you help me? I do not understand musch of R software and I just

[R] (no subject)

2013-08-25 Thread Tyler Rinker
Greeting R Community, Greetings R Community, I am attempting to make sure a parent package passes all CRAN checks for the dev version (R Under development (unstable) (2013-08-24 r63687) -- Unsuffered Consequences).  The parent package I'm compiling relies on another package that is purely a

[R] (no subject)

2013-08-23 Thread rajib prasad
I am new to R. I have a data like: x y z w p .. m 1 1015 20 25 30 2 11 1621 26 31 3 12 171819 20

Re: [R] (no subject)

2013-08-23 Thread Anindya Sankar Dey
You can easily subset the data then use rowSum. say your dataset name is data1. then write data2-data[,c(7,12,45,57)] then write result-rowsum(data2) On Fri, Aug 23, 2013 at 3:47 PM, rajib prasad rwho2...@gmail.com wrote: I am new to R. I have a data like: x

Re: [R] (no subject)

2013-08-23 Thread arun
- From: rajib prasad rwho2...@gmail.com To: r-help@r-project.org Cc: Sent: Friday, August 23, 2013 6:17 AM Subject: [R] (no subject) I am new to R. I have a data like:                               x      y      z      w      p  ..      m                       1    10    15    20    25

Re: [R] (no subject)

2013-08-23 Thread PIKAL Petr
with your R installation. Petr -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of rajib prasad Sent: Friday, August 23, 2013 12:18 PM To: r-help@r-project.org Subject: [R] (no subject) I am new to R. I have a data like

Re: [R] (no subject)

2013-08-02 Thread Jim Lemon
On 08/02/2013 01:29 PM, Babu Guha wrote: I have a comma delimited file with 62 fields of which some are comments. There are about 1.5 million records/lines. Sme of the fields which has comments and which i do not need have 40 characters. Of the 62 fields, I will need at most 12 fields. What's

[R] (no subject)

2013-08-01 Thread Babu Guha
I have a comma delimited file with 62 fields of which some are comments. There are about 1.5 million records/lines. Sme of the fields which has comments and which i do not need have 40 characters. Of the 62 fields, I will need at most 12 fields. What's best way to read in the fields I need. If I

[R] (no subject)

2013-07-23 Thread Nicole Prause
Dear Community, I found a very similar problem to mine that also had no response from 2009 using library sem and polycor: http://www.mail-archive.com/r-help@r-project.org/msg65158.html I have a five-factor latent model that converges when using a covariance matrix, but fails to converge when

Re: [R] (no subject)

2013-07-17 Thread Jim Lemon
On 07/17/2013 01:41 PM, labib obaid wrote: hi I need to use boxplot for two subsets at the same page Hi labib obaid, Try this: test.df-data.frame(a=rnorm(80)+4,b=rnorm(80)+4, c=rep(LETTERS[1:4],each=20), d=rep(rep(letters[1:4],each=4),5)) boxplot(test.df$a[test.df$c %in% c(A,B)],

[R] (no subject)

2013-07-16 Thread labib obaid
hi I need to use boxplot for two subsets at the same page thank you in advance Sent from Windows Mail [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the

[R] (no subject)

2013-07-15 Thread kiran subedi
Hi, I am a researcher in chemistry. I have to do pls-da for some of my samples. The number of variables for my sample is 4000 . The categorical variable has two classes. Some of the values are missing (cant find out). I s there any package for R (or any illustration that would be helpful) to

Re: [R] (no subject)

2013-07-15 Thread PIKAL Petr
:51 AM To: r-help@r-project.org Subject: [R] (no subject) Hi, I am a researcher in chemistry. I have to do pls-da for some of my samples. The number of variables for my sample is 4000 . The categorical variable has two classes. Some of the values are missing (cant find out). I s there any

Re: [R] (no subject)

2013-07-15 Thread Bryan Hanson
Look at the package chemometrics, it can certainly handle your number of variables (p n is what that's called and it requires special considerations). I don't recall about missing values. The authors of that package also have a very helpful text. Good Luck. Bryan On Jul 14, 2013, at 10:50

[R] (no subject)

2013-07-08 Thread Asan Ramzan
Hello R-help   Does anyone know if there is a package for global fit analysis and if so how to use it.  I am trying to calculate the Kd value of a protein interacting with  its ligand (When protein interacts with ligand this effect a number of residues). The table below shows with increasing

Re: [R] (no subject)

2013-06-24 Thread Adams, Jean
What was the line of code you submitted right before the error? Jean On Sat, Jun 22, 2013 at 12:36 AM, lay khoon lovelybear...@gmail.com wrote: Hi, I had been using a script that works fine for several days and then I stopped using it for a month without having doubt that it would

[R] (no subject)

2013-06-22 Thread lay khoon
Hi, I had been using a script that works fine for several days and then I stopped using it for a month without having doubt that it would not be working. When I use it again today, I received an error when I reach the last step of generating the data file. *Error in .jcall(wb,

[R] (no subject)

2013-05-29 Thread alex mutuku
hallo,i have a problem with running some code in R2Winbugs am getting the following error.Error in FUN(X[[2L]], ...)  What might be the problem.with kind regards.Alex [[alternative HTML version deleted]] __ R-help@r-project.org mailing list

Re: [R] (no subject)

2013-05-29 Thread Pascal Oettli
Hello, I would say: 1. Which R version? 2. Which OS? 3. Where is the requested commented, minimal, self-contained, reproducible code? Regards, Pascal On 05/29/2013 10:05 AM, alex mutuku wrote: hallo,i have a problem with running some code in R2Winbugs am getting the following error.Error

Re: [R] (no subject)

2013-05-29 Thread peter dalgaard
On May 29, 2013, at 08:48 , Pascal Oettli wrote: Hello, I would say: 1. Which R version? 2. Which OS? 3. Where is the requested commented, minimal, self-contained, reproducible code? 4. Use a sensible Subject: line, instead of contributing to the (no subject) thread, which on my

[R] (no subject)

2013-05-22 Thread Dimitri Liakhovitski
Dear Bernhard, I am using your R package “var”. I am interested in running impulse response analysis (using ‘irf’) and error variance decomposition (using ‘fevd’). I have two questions: -What decomposition method do you use in your package – Cholesky? -What is the order of entry of the

[R] (no subject)

2013-05-10 Thread Smith Freeman
Hello, I am attempting to use the classInt package in conjunction with rworldmap package in R to construct a chloropleth. I want to use the fixedBreaks argument to specify given breaks. My data look like this: head(Maji) Country waterused CC 1 Afghanistan 36

Re: [R] (no subject)

2013-05-10 Thread Michael Sumner
What does ww[[waterused]] have to do with Maji? On Sat, May 11, 2013 at 10:07 AM, Smith Freeman smithifree...@gmail.com wrote: Hello, I am attempting to use the classInt package in conjunction with rworldmap package in R to construct a chloropleth. I want to use the fixedBreaks argument to

Re: [R] (no subject)

2013-05-03 Thread David Winsemius
On May 2, 2013, at 4:15 PM, T P Kharel wrote: I have posted a R copula question yesterday but it is not accepted yet. How long does it take? Generally moderated postings are accepted within 4-6 hours, usually sooner. I am waiting if some one can help me on my Copula package related

[R] (no subject)

2013-05-03 Thread Tien trung Dinh
Hi. After I installed R 3.0.0.pkg for mac version , when click the icon R to startup . I receive the annoucement in red color to inform that something wrongs , but I do not know how to fix them . R version 3.0.0 (2013-04-03) -- Masked Marvel Copyright (C) 2013 The R Foundation for Statistical

Re: [R] (no subject)

2013-05-03 Thread David Winsemius
On May 3, 2013, at 9:44 AM, Tien trung Dinh wrote: Hi. After I installed R 3.0.0.pkg for mac version , when click the icon R to startup . I receive the annoucement in red color to inform that something wrongs , but I do not know how to fix them . R version 3.0.0 (2013-04-03) -- Masked

[R] (no subject)

2013-05-02 Thread T P Kharel
I have posted a R copula question yesterday but it is not accepted yet. How long does it take? I am waiting if some one can help me on my Copula package related question. Thanks [[alternative HTML version deleted]] __ R-help@r-project.org

[R] (no subject)

2013-04-15 Thread ilovestats
Hi, I'm trying to decide between doing a FA or PCA and would appreciate some pointers. I've got a questionnaire with latent items which the participants answered on a Likert scale, and all I want to do at this point is to explore the data and extract a number of factors/components. Would FA or PCA

Re: [R] (no subject)

2013-04-15 Thread peter dalgaard
On Apr 15, 2013, at 14:30 , ilovestats wrote: Hi, I'm trying to decide between doing a FA or PCA and would appreciate some pointers. I've got a questionnaire with latent items which the participants answered on a Likert scale, and all I want to do at this point is to explore the data and

[R] (no subject)

2013-04-11 Thread Kenn Konstabel
Dear all, Is there a quick and easy way of converting utf characters to the \u form (necessary e.g. for packages)? I mean something working like this: utf2u(õäöü) [1] \u00f5\u00e4\u00f6\u00fc It is easy to program but perhaps someone already has implemented this. (I couldn't find

Re: [R] (no subject)

2013-04-11 Thread Duncan Murdoch
On 13-04-11 7:56 AM, Kenn Konstabel wrote: Dear all, Is there a quick and easy way of converting utf characters to the \u form (necessary e.g. for packages)? I mean something working like this: utf2u(õäöü) [1] \u00f5\u00e4\u00f6\u00fc It is easy to program but perhaps someone

Re: [R] (no subject)

2013-04-11 Thread arun
(64-bit) A.K. - Original Message - From: Kenn Konstabel lebats...@gmail.com To: R-help r-h...@stat.math.ethz.ch Cc: Sent: Thursday, April 11, 2013 7:56 AM Subject: [R] (no subject) Dear all, Is there a quick and easy way of converting utf characters to the \u form (necessary e.g

Re: [R] (no subject)

2013-04-11 Thread Kenn Konstabel
-help r-h...@stat.math.ethz.ch Cc: Sent: Thursday, April 11, 2013 7:56 AM Subject: [R] (no subject) Dear all, Is there a quick and easy way of converting utf characters to the \u form (necessary e.g. for packages)? I mean something working like this: utf2u(還簡) [1] \u00f5\u00e4

[R] (no subject)

2013-04-08 Thread neal subscribe
Hi I would like to normalize my data by one of the variables in long format. My data is like this: t1-data.frame(id=rep(1:3,rep(3,3)),dt=rep(1:3,rep(9,3)),var=c('num1','num2','norm'),value=rnorm(27)) t1 id dt var value 1 1 1 num1 -1.83276256 2 1 1 num2 1.57034303 3 1 1 norm

Re: [R] (no subject)

2013-04-08 Thread arun
  0.30611744 #5  3  1 num1 -0.94940980 #6  3  1 num2 -0.06622304 A.K. - Original Message - From: neal subscribe nealsubscr...@gmail.com To: r-help@r-project.org Cc: Sent: Monday, April 8, 2013 10:49 PM Subject: [R] (no subject) Hi I would like to normalize my data by one

Re: [R] (no subject)

2013-04-08 Thread arun
smartpink...@yahoo.com To: neal subscribe nealsubscr...@gmail.com Cc: R help r-help@r-project.org Sent: Tuesday, April 9, 2013 12:59 AM Subject: Re: [R] (no subject) Hi, Try this: set.seed(28)   t1-data.frame(id=rep(1:3,rep(3,3)),dt=rep(1:3,rep(9,3)),var=c('num1','num2','norm'),value=rnorm(27))  head(t1

[R] (no subject)

2013-04-05 Thread Qingqing Qu
Hello, I am running error rate analysis. It is my results below. When I compare aov1 and aov2, X square = 4.05, p = 0.044, which indicates that adding the factor Congruity improved the fitting of model. However, the following Z value is less than 1 and p value for Z is 1, which means that

Re: [R] (no subject)

2013-04-05 Thread Mark Sharp
Ana, I cannot help you with how to include weights in your analysis. However, you can use formals(poLCA) or ?poLCA to see that weights is not one of the acceptable arguments. R ignores arguments not used by the called function because functions within the called function may use them. You can

[R] (no subject)

2013-04-03 Thread Ana Lucía Cárdenas Martínez
Hello, I want to perform a latent class analysis using poLCA package. My formula is: substances - cbind(subs1, subs2, subs3, subs4, subs5, subs6) ~ gender+age+education+income+occupation+urban+dbehavior+incarceration+treatment+depression+alcriteria I want to include sample weights in the

Re: [R] (no subject)

2013-03-10 Thread Thomas Lumley
On Thu, Mar 7, 2013 at 6:36 PM, Peter Maclean pmaclean2...@yahoo.comwrote: Is there a R package that use sampling weights in multilevel modeling? The survey package does not handle multilevel modeling and the weight option in lmer and nlmer functions from lme4 (used for multilevel modeling) is

Re: [R] (no subject)

2013-03-06 Thread Peter Maclean
Is there a R package that use sampling weights in multilevel modeling? The survey package does not handle multilevel modeling and the weight option in lmer and nlmer functions from lme4 (used for multilevel modeling) is for weighted least squares estimation. Suggestion from one with experience

Re: [R] (no subject)

2013-02-22 Thread PIKAL Petr
:36 AM To: PIKAL Petr Cc: nandita srivastava; r-help@r-project.org Subject: Re: [R] (no subject) Huh? This answer seems to have absolutely no bearing on the question. cheers, Rolf Turner On 02/21/2013 11:26 PM, PIKAL Petr wrote: Hi ?ncol Regards Petr

Re: [R] (no subject)

2013-02-21 Thread Pascal Oettli
Q: how to sum columns in R? A: use a web search engine Le 21/02/2013 16:33, nandita srivastava a écrit : how to sum columns in R? __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide

Re: [R] (no subject)

2013-02-21 Thread PIKAL Petr
Hi ?ncol Regards Petr -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of nandita srivastava Sent: Thursday, February 21, 2013 8:34 AM To: r-help@r-project.org Subject: [R] (no subject) how to sum columns in R

Re: [R] (no subject)

2013-02-21 Thread Michael Weylandt
To: r-help@r-project.org Subject: [R] (no subject) how to sum columns in R? __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting- guide.html

Re: [R] (no subject)

2013-02-21 Thread Rui Barradas
Hello, http://lmgtfy.com/?q=sum+columns+in+R The first hit looks promising. Hope this helps, Rui Barradas Em 21-02-2013 07:33, nandita srivastava escreveu: how to sum columns in R? __ R-help@r-project.org mailing list

Re: [R] (no subject)

2013-02-21 Thread Rolf Turner
Of nandita srivastava Sent: Thursday, February 21, 2013 8:34 AM To: r-help@r-project.org Subject: [R] (no subject) how to sum columns in R? __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http

[R] (no subject)

2013-02-06 Thread Laura de Mergelina
Where can I mark the option to not receive emails from users? -- Laura de Mergelina __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and

Re: [R] (no subject)

2013-02-06 Thread David Winsemius
On Feb 6, 2013, at 3:16 AM, Laura de Mergelina wrote: Where can I mark the option to not receive emails from users? -- Laura de Mergelina __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the

Re: [R] (no subject)

2013-02-06 Thread David Winsemius
On Feb 6, 2013, at 3:16 AM, Laura de Mergelina wrote: Where can I mark the option to not receive emails from users? I didn't mean to hit reply, but rather to copy the link that is at the bottom of every posting. ( So I guess my empty reply actually could be construed as being relevant.)

[R] (no subject)

2013-01-30 Thread Meenakshi Shankar Santhakumar
Dear Team, I am getting the following error message when try to run vb application The program was running fine in 32 windows 7 machine. When i moved the same program to 64 bit windows 8 machine i am getting the following error Error in inDL(x, as.logical(local), as.logical(now), ...) : unable

Re: [R] (no subject)

2013-01-08 Thread S Ellison
I am using the nls function and it stops because the number of iterations exceeded 50, but i used the nls.control argument to allow for 500 iterations. Do you have any idea why it's not working? Not entirely. But I do see in the code for SSgompertz that SSgompertz calls nls _without_ specifying

[R] (no subject)

2013-01-04 Thread Karine HEERAH
Hi, I am using the nls function and it stops because the number of iterations exceeded 50, but i used the nls.control argument to allow for 500 iterations. Do you have any idea why it's not working? fm1 - nls(npe ~ SSgompertz(npo, Asym, b2, b3), data=f,control=nls.control(maxiter=500)) Error

[R] (no subject)

2012-12-31 Thread eliza botto
Dear useRs, I am getting following error while using my R java machine. Error: OutOfMemoryError (Java): Java heap space to get rid of it i used options( java.parameters = -Xmx1200m) but unfortunatly its not working Does anyone ever encountered this error?? thanks in advance... elisa

Re: [R] (no subject)

2012-12-31 Thread Steve Lianoglou
Hi, Firstly -- please use an informative (non-empty!) subject line in your emails. On Mon, Dec 31, 2012 at 11:54 AM, eliza botto eliza_bo...@hotmail.com wrote: Dear useRs, I am getting following error while using my R java machine. Error: OutOfMemoryError (Java): Java heap space to get rid

Re: [R] (no subject) low memory in rjava

2012-12-31 Thread eliza botto
. my system has a RAM of 4gb. yes, i have increased the value of Xmx to 1gb. the output of my session info isR version 2.15.2 (2012-10-26) Platform: i386-w64-mingw32/i386 (32-bit)regardselisa Date: Mon, 31 Dec 2012 12:52:44 -0500 Subject: Re: [R] (no subject) From: mailinglist.honey

Re: [R] (no subject) low memory in rjava

2012-12-31 Thread jim holtman
Date: Mon, 31 Dec 2012 12:52:44 -0500 Subject: Re: [R] (no subject) From: mailinglist.honey...@gmail.com To: eliza_bo...@hotmail.com CC: r-help@r-project.org Hi, Firstly -- please use an informative (non-empty!) subject line in your emails. On Mon, Dec 31, 2012 at 11:54 AM, eliza

Re: [R] (no subject) low memory in rjava

2012-12-31 Thread eliza botto
Dear Jim, alot of love for you. i only converted .xlsx to .xls and it worked. thankyouhappy new yearkeep rocking.happy new year to all. this will be my last post of this year.thanks once again.. elisa Date: Mon, 31 Dec 2012 15:44:31 -0500 Subject: Re: [R] (no subject) low memory

[R] (no subject)

2012-12-23 Thread Ali Mahmoudi
Hi, what's the function to use 'path analysis' in R?  [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide

[R] lme: subject-specific slopes.

2012-12-04 Thread John Sorkin
I am running a random intercept random slope regression: fitRIRT - lme(echogen~time,random=~ 1+time|subject,data=repeatdata,na.action=na.omit) summary(fitRIRT) I would like to get the subject-specific slopes, i.e. the slope that the model computes for each subject. If I have 10-subjects I

Re: [R] lme: subject-specific slopes.

2012-12-04 Thread John Sorkin
Ken, Thank you for your help. ranef(fitRIRT) does not give me what I expect. The subject-specific slopes, and subject-specific intercepts are not anywhere close to what I would expect them to be; the mean of the subject-specfic values should be close to those reported by summary(fitRIRT) and

Re: [R] lme: subject-specific slopes.

2012-12-04 Thread Kenneth Frost
I think the random effects represent the subject adjustments to the population averages. You may have to do the addition yourself to get the subject specific slopes and intercepts. Someone will hopefully correct me if I'm wrong. On 12/04/12, John Sorkin wrote: Ken, Thank you for your

Re: [R] lme: subject-specific slopes.

2012-12-04 Thread John Sorkin
Yes, you are correct. Thanks, John John David Sorkin M.D., Ph.D. Chief, Biostatistics and Informatics University of Maryland School of Medicine Division of Gerontology Baltimore VA Medical Center 10 North Greene Street GRECC (BT/18/GR) Baltimore, MD 21201-1524 (Phone) 410-605-7119 (Fax)

Re: [R] lme: subject-specific slopes.

2012-12-04 Thread Brian S Cade
, Kenneth Frost kfr...@wisc.edu Date: 12/04/2012 09:10 AM Subject: Re: [R] lme: subject-specific slopes. Sent by: r-help-boun...@r-project.org Ken, Thank you for your help. ranef(fitRIRT) does not give me what I expect. The subject-specific slopes, and subject-specific intercepts are not anywhere

[R] (no subject)

2012-11-30 Thread bibek sharma
Hello R usuer, The code given below superimposes a pie diagram on another plot containing some points. However, I would like to center the pie diagram on the xy location on the plot, but not on the center. is there any way to re-center pic diagram. Any suggestion or better alternative are highly

Re: [R] (no subject)

2012-11-30 Thread William Dunlap
- From: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] On Behalf Of bibek sharma Sent: Friday, November 30, 2012 2:07 PM To: R help Subject: [R] (no subject) Hello R usuer, The code given below superimposes a pie diagram on another plot containing some points. However, I

Re: [R] (no subject)

2012-11-30 Thread William Dunlap
To: William Dunlap Subject: Re: [R] (no subject) Thank you Bill. I want pie of equal sector. I tried your code but did not work.dont know why? Any suggestion? library(visualFields) library(car) a-saplocmap$p24d2 ordinate-data.frame(a$xod,a$yod) ordinate plot( a$xod,a$yod, xlim=c(-30,30

Re: [R] (no subject)

2012-11-30 Thread William Dunlap
To: William Dunlap Subject: Re: [R] (no subject) Hello Bill, Your code works perfectly and got a nice plot. No problem there. But I wanted to center the pie diagram obtained from cars - c(1,1,1,1,1,1,1,1) color1 - c(grey80,grey80,grey80,grey80,gray80,grey30,grey20,gray10) pie(cars,col=color1

[R] (no subject)

2012-11-22 Thread Sarah AdDawsary
__ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

Re: [R] (no subject)

2012-11-18 Thread Dimitri Liakhovitski
Sorry, got the answer (ticktype): persp(x, y, z1,box = TRUE, axes = TRUE,ticktype=detailed) Thanks! D. On Sun, Nov 18, 2012 at 8:20 PM, Dimitri Liakhovitski dimitri.liakhovit...@gmail.com wrote: Dear R-ers, I have 3 vectors - x, y, and z and want to plot a surface (z as the 3rd

[R] (no subject)

2012-11-09 Thread Manasvi Dobhal
Hi all, The TWS on my system is unable to connect to my R session. Here is the error that I'm getting: * tws-twsConnect() Error in socketConnection(host = host, port = port, open = ab, blocking = blocking) : cannot open the connection In addition: Warning message: In socketConnection(host = host,

[R] (no subject)

2012-11-06 Thread Raju Maiti
I have faced one problem in maximizing a very complicated likelihood through R-package GenSA. But it takes huge time. But I have to replicates the process for more than 1000 times. Could you suggest me some other packages which can handle such likelihood function quickly. regrads, Raju --

[R] (no subject)

2012-11-01 Thread Dan Murphy
-hochschule.de *To: r-help@r-project.org *Subject: [R] subtract a time period from a date* *Message-ID: da0fe68e813f16a23fae69a3398e0...@beuth-hochschule.de *Content-Type: text/plain; charset=UTF-8; format=flowed* * *Hello everybody, *how can I reduce e.g. 30 days from a date?* *When I do the following 2011

[R] (no subject)

2012-10-29 Thread Quincy A. Edwards
-- Quincy A. Edwards http://www.quincyedwards.com __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal,

[R] (no subject)

2012-10-14 Thread Erin Hodgess
-- Erin Hodgess Associate Professor Department of Computer and Mathematical Sciences University of Houston - Downtown mailto: erinm.hodg...@gmail.com __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the

[R] (no subject)

2012-10-11 Thread louise wilson
Hi All, I am performing GEV analysis on temperature/precipitation data using L moments: dim(data) [1] 145 192 156 Lmoments - apply(data, 1:2, function(x) samlmu(x,nmom=4,sort.data=TRUE)) params_GEV - apply(Lmoments,2:3,pelgev) location - params_GEV[1,,] (xi) scale - params_GEV[2,,]

Re: [R] (no subject)

2012-10-07 Thread Rui Barradas
Hello, You must install the appropriate package(s). Try, for instance, install.packages('rugarch') # do this only once And then, every time you start an R session, if you want to use it, library(rugarch) # do this every R session To know more, try help('rugarch') vignette(package =

Re: [R] (no subject)

2012-10-05 Thread Jean V Adams
DL, Looks like you have a typo in the expression() function. You had only one s. This works for me ... m - 10 beta.q - matrix(rnorm(81), ncol=9) for (i in 1:9){ plot(seq(1/m, 1-1/m, 1/m), beta.q[, i], type=l, col=1, ylim=range(beta.q), xlab=quantile, ylab=expression(beta[i])) }

[R] (no subject)

2012-10-04 Thread dick liang
producing a multi-figure plot, i am try to add beta_1, beta_2,.. beta_9 to ylab using expression or substitution, but cannot work out like for (i in 1:9){ plot(seq(1/m, 1-1/m, 1/m), beta.q[,i], type=l, col=1, ylim=range(beta.q), xlab=quantile, ylab=expresion(beta[i])) } any suggestions

[R] (no subject)

2012-10-04 Thread Chia-Yi Chiu
Hi I would like to learn how the R function hclust deals with ties. It is written in Fortran, so I cannot access the code. Thanks!! [[alternative HTML version deleted]] __ R-help@r-project.org mailing list

Re: [R] (no subject)

2012-10-04 Thread Sarah Goslee
On Thu, Oct 4, 2012 at 1:40 PM, Chia-Yi Chiu chia-yi.c...@gse.rutgers.edu wrote: Hi I would like to learn how the R function hclust deals with ties. It is written in Fortran, so I cannot access the code. Thanks!! Sure you can. Just download the source from r-project.org. -- Sarah Goslee

Re: [R] (no subject)

2012-10-04 Thread Jeff Newmiller
Please use a relevant subject line. You can easily download source code for all CRAN packages and read it yourself. --- Jeff NewmillerThe . . Go Live... DCN:jdnew...@dcn.davis.ca.us

Re: [R] (no subject)

2012-10-04 Thread R. Michael Weylandt
On Thu, Oct 4, 2012 at 8:55 PM, Sarah Goslee sarah.gos...@gmail.com wrote: On Thu, Oct 4, 2012 at 1:40 PM, Chia-Yi Chiu chia-yi.c...@gse.rutgers.edu wrote: Hi I would like to learn how the R function hclust deals with ties. It is written in Fortran, so I cannot access the code. Thanks!!

Re: [R] (no subject)

2012-10-03 Thread John Kane
- and you have an immediately useful John Kane Kingston ON Canada -Original Message- From: mbhpat...@gmail.com Sent: Tue, 2 Oct 2012 09:27:57 -0700 To: jrkrid...@inbox.com Subject: Re: [R] (no subject) Hello John, Here is the code, data set and resutls that I got. I want

Re: [R] (no subject)

2012-10-03 Thread arun
, 2012 1:51 PM Subject: Re: [R] (no subject) I have copied this to the R-help list. You only repied to me and it is much likelier that you will get help if it is posted to the list.  In relpying you should generally use reply all rather than reply in posting. I still don't quite see what you

Re: [R] (no subject)

2012-10-03 Thread arun
...@inbox.com To: bibek sharma mbhpat...@gmail.com Cc: r-help@r-project.org Sent: Wednesday, October 3, 2012 1:51 PM Subject: Re: [R] (no subject) I have copied this to the R-help list. You only repied to me and it is much likelier that you will get help if it is posted to the list.  In relpying

Re: [R] (no subject)

2012-10-03 Thread peter dalgaard
On Oct 3, 2012, at 22:27 , arun wrote: HI, I guess I understand what you meant (read the very first post on the same subject). Umm, the first post on (no subject) that I have is about Ruby on Rails from March 2010 Please use sensible subject lines, folks! -pd -- Peter Dalgaard,

Re: [R] (no subject)

2012-10-02 Thread John Kane
: Mon, 1 Oct 2012 14:25:20 -0700 To: r-help@r-project.org Subject: [R] (no subject) Hello, I am a new R -user and request your help for the following problem. I need to merge two dataset of longitudinal study which has two column (id and respose) common. when I used merge option to join

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