I need to perform maximum likelihood estimation on R, but I am not sure
which command to use. I searched on google, and found an example using the
function mlogl, but I couldn't find the package on R. Is there such
function? Or how should i perform my mle?
Hello!
I need to perform maximum likelihood estimation on R, but I am not sure
which command to use. I searched on google, and found an example using the
function mlogl, but I couldn't find the package on R. Is there such
function? Or how should i perform my mle?
Thank you very much.
--
View
On Wed, Jul 18, 2007 at 08:08:50AM -0700, rach.s wrote:
Hello!
I need to perform maximum likelihood estimation on R, but I am not sure
which command to use. I searched on google, and found an example using the
function mlogl, but I couldn't find the package on R. Is there such
function?
Hello!
I am looking for a function which computes the maximum likelihood
estimator of the autocorrelation function for a gaussian time series.
Does a such function already exist in R?
The estimator by default in R, acf(), uses the method of moments.
Thanks a lot,
Alain
--
Alain Guillet
You will need to give us a reference, as the acf is not a parameter in a
model in your description and MLEs apply to model parameters.
Just possibly ar.mle is what you are looking for, perhaps plus ARMAacf?
On Fri, 12 Jan 2007, Alain Guillet wrote:
Hello!
I am looking for a function which
Prof. Brian Ripley,
You are right, my question was not clear.
In fact, I want to estimate the k first components of the acf, i.e. I
want to estimate the k parameters (c(0),c(1),...c(k-1)), where c is the
autocorrelation function, by a maximum likelihood estimator.
Alain
Prof Brian Ripley a
On Fri, 12 Jan 2007, Alain Guillet wrote:
Prof. Brian Ripley,
You are right, my question was not clear.
In fact, I want to estimate the k first components of the acf, i.e. I
want to estimate the k parameters (c(0),c(1),...c(k-1)), where c is the
autocorrelation function, by a maximum
In fact, I need it in the general case, not only for an ARMA process.
Unfortunately, I have no reference to give so I will code it. Sorry for
the trouble.
Alain
Prof Brian Ripley a écrit :
On Fri, 12 Jan 2007, Alain Guillet wrote:
Prof. Brian Ripley,
You are right, my question was not
Hi guys again, it seems I haven't been doing the maximum likelihood
estimation correctly. I quote below, can someone explain to me please what
does it mean that the 2nd and 3rd derivatives of the function equals zero
and how to compute that in R.
We have our initial estimated, subjective
francogrex francogrex at mail.com writes:
[SNIP]
This maximisation involves a search in five-dimensional
parameter space {θ: α1,α2, β1, β2, P} for the vector that maximises the
likelihood as evidenced by the first and second derivatives of the function
being zero. The likelihood is L(θ) =
Hi Guys, it would be great if you could help me with a MLE problem in R.
I am trying to evaluate the maximum likelihood estimates of theta = (a1,
b1, a2, b2, P) which defines a mixture of a Poisson distribution and two
gamma prior distributions (where the Poisson means have a gamma
Franco,
You can provide lower and upper bounds on the parameters if you use optim
with method=L-BFGS-B.
Hth, Ingmar
From: francogrex [EMAIL PROTECTED]
Date: Fri, 5 Jan 2007 04:54:50 -0800 (PST)
To: r-help@stat.math.ethz.ch
Subject: [R] maximum likelihood estimation of 5 parameters
Hi
Franco,
You can provide lower and upper bounds on the parameters if you use optim
with method=L-BFGS-B.
Hth, Ingmar
Thanks, but when I use L-BFGS-B it tells me that there is an error in
optim(start, f, method = method, hessian = TRUE, ...) : L-BFGS-B needs
finite values of 'fn'
--
View this
On Fri, 5 Jan 2007, francogrex wrote:
[quoting Ingmar Vissar without attribution, contrary to the posting
guide.]
Franco,
You can provide lower and upper bounds on the parameters if you use optim
with method=L-BFGS-B.
Hth, Ingmar
Thanks, but when I use L-BFGS-B it tells me that there is
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of francogrex
Sent: Friday, January 05, 2007 10:42 AM
To: r-help@stat.math.ethz.ch
Subject: Re: [R] maximum likelihood estimation of 5 parameters
Franco,
You can provide lower and upper bounds
Using the inverse logistic transform to replace p by exp(xp)/(1+exp(xp)) allows
unconstrained fitting of xp. There may still be problems where xp tends to + or
- infinity depending on starting values.
francogrex [EMAIL PROTECTED] 01/05/07 11:54 PM
Hi Guys, it would be great if you could help
Subject: Re: [R] maximum likelihood estimation of 5 parameters
Franco,
You can provide lower and upper bounds on the parameters if you use optim
with method=L-BFGS-B.
Hth, Ingmar
Thanks, but when I use L-BFGS-B it tells me that there is an error in
optim(start, f, method = method
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of francogrex
Sent: Friday, January 05, 2007 10:42 AM
To: r-help@stat.math.ethz.ch
Subject: Re: [R] maximum likelihood estimation of 5 parameters
Franco,
You can provide lower and upper bounds
Alexandre Bonnet bonnet at gmail.com writes:
*hi,*
*using articial data, i'm supposed to estimate model*
*y(t) = beta(1) + beta(2)*x(t) + u(t), u(t) = gamma*u(t-1) + v(t), t =
1,...,100*
*which is correctly specified in two ways: ML ommiting the first
observation, and ML using all
hi,
using articial data, i'm supposed to estimate model
y(t) = beta(1) + beta(2)*x(t) + u(t), u(t) = gamma*u(t-1) + v(t), t =
1,...,100
which is correctly specified in two ways: ML ommiting the first observation,
and ML using all 100 observation.
since i'm still learning how to use R, i would
*hi,*
*using articial data, i'm supposed to estimate model*
*y(t) = beta(1) + beta(2)*x(t) + u(t), u(t) = gamma*u(t-1) + v(t), t =
1,...,100*
*which is correctly specified in two ways: ML ommiting the first
observation, and ML using all 100 observation.*
*since i'm still learning how to use R,
]
Cc: Bart Joosen [EMAIL PROTECTED]; r-help@stat.math.ethz.ch
Sent: Sunday, June 11, 2006 5:20 PM
Subject: Re: [R] Maximum likelihood estimation of Regression parameters
Have you looked at lm? I think that's what you want.
Also, have you reviewed the Documentation list at
www.r
Have you looked at lm? I think that's what you want.
Also, have you reviewed the Documentation list at
www.r-project.org? Neter, Kutner, nachtsheim Wasserman has had a
long and successful run having first appeared in 1974 and having gone
through several editions since
Hi,
I want to use Maximum likelihood to estimate the parameters from my regression
line.
I have purchased the book Applied linear statistical models from Neter,
Kutner, nachtsheim Wasserman, and in one of the first chapters, they use
maximum likelihood to estimate the parameters.
Now I want
mle(stats4)Maximum Likelihood Estimation
is it list above what you want?
On 6/10/06, Bart Joosen [EMAIL PROTECTED] wrote:
Hi,
I want to use Maximum likelihood to estimate the parameters from my regression
line.
I have purchased the book Applied linear statistical models from
[mailto:[EMAIL PROTECTED]
Sent: May 12, 2006 4:35 PM
To: Chaouch, Aziz
Subject: RE: [R] Maximum likelihood estimate of bivariate
vonmises-weibulldistribution
look at the following code:
library(copula)
par(mfrow = c(2, 2))
x - mvdc(normalCopula(sin(0.5 * pi /2)), c(norm, norm),
list(list(mean
Subject: Re: [R] Maximum likelihood estimate of bivariatevonmises-
weibulldistribution
Hi,
I'm still strugling with this copula model but this seems to be the way
to go. I'm now trying to model the marginal distributions and and for
wind direction I use a mixture of 2 von mises. I'd like
helpful!
Regards,
Aziz
-Original Message-
From: Ravi Varadhan [mailto:[EMAIL PROTECTED]
Sent: May 26, 2006 12:18 PM
To: Chaouch, Aziz
Cc: r-help@stat.math.ethz.ch
Subject: RE: [R] Maximum likelihood estimate of
bivariatevonmises-weibulldistribution
Hi Aziz,
I am attaching a file
[mailto:[EMAIL PROTECTED]
Sent: May 12, 2006 4:35 PM
To: Chaouch, Aziz
Subject: RE: [R] Maximum likelihood estimate of bivariate
vonmises-weibulldistribution
look at the following code:
library(copula)
par(mfrow = c(2, 2))
x - mvdc(normalCopula(sin(0.5 * pi /2)), c(norm, norm),
list(list(mean
:35 PM
To: Chaouch, Aziz
Subject: RE: [R] Maximum likelihood estimate of bivariate
vonmises-weibulldistribution
look at the following code:
library(copula)
par(mfrow = c(2, 2))
x - mvdc(normalCopula(sin(0.5 * pi /2)), c(norm, norm),
list(list(mean = 0, sd = 1), list(mean = 0, sd = 1))) contour(x
Merci Etienne! I'll look at them with great interest.
Aziz
-Original Message-
From: Cuvelier Etienne [mailto:[EMAIL PROTECTED]
Sent: May 15, 2006 10:25 AM
To: Chaouch, Aziz
Cc: r-help@stat.math.ethz.ch
Subject: Re: [R] Maximum likelihood estimate of bivariate
vonmises
r-help@stat.math.ethz.ch on Saturday, May 13, 2006 at 6:00 AM -0500 wrote:
One of my friends recently wrote his PhD thesis from University of
Leeds under Kanti Mardia's direction.
I bet your friend was really angling for that.
--
Alan B. Cobo-Lewis, Ph.D. (207) 581-3840 tel
- Original Message -
From: Philip He [EMAIL PROTECTED]
To: Chaouch, Aziz [EMAIL PROTECTED]
Cc: r-help@stat.math.ethz.ch
Sent: Thursday, May 11, 2006 11:21 PM
Subject: Re: [R] Maximum likelihood estimate of bivariate
vonmises-weibulldistribution
On 5/11/06, Chaouch, Aziz [EMAIL
!
Regards,
Aziz
-Original Message-
From: Dimitris Rizopoulos [mailto:[EMAIL PROTECTED]
Sent: May 12, 2006 3:01 AM
To: Philip He; Chaouch, Aziz
Cc: r-help@stat.math.ethz.ch
Subject: Re: [R] Maximum likelihood estimate of bivariate
vonmises-weibulldistribution
- Original Message -
From
/
http://www.student.kuleuven.be/~m0390867/dimitris.htm
- Original Message -
From: Chaouch, Aziz [EMAIL PROTECTED]
To: Dimitris Rizopoulos [EMAIL PROTECTED];
[EMAIL PROTECTED]
Cc: r-help@stat.math.ethz.ch
Sent: Friday, May 12, 2006 3:13 PM
Subject: RE: [R] Maximum likelihood estimate
]
--
-Original Message-
From: [EMAIL PROTECTED] [mailto:r-help-
[EMAIL PROTECTED] On Behalf Of Chaouch, Aziz
Sent: Friday, May 12, 2006 9:13 AM
To: Dimitris Rizopoulos; [EMAIL PROTECTED]
Cc: r-help@stat.math.ethz.ch
Subject: Re: [R] Maximum likelihood estimate
and then see how to choose the best copula model as you
suggested.
Aziz
-Original Message-
From: Ravi Varadhan [mailto:[EMAIL PROTECTED]
Sent: May 12, 2006 1:41 PM
To: Chaouch, Aziz; 'Dimitris Rizopoulos'; [EMAIL PROTECTED]
Cc: r-help@stat.math.ethz.ch
Subject: RE: [R] Maximum likelihood
, Aziz; [EMAIL PROTECTED]
Cc: r-help@stat.math.ethz.ch
Subject: Re: [R] Maximum likelihood estimate of bivariate
vonmises-weibulldistribution
the choice of the copula is, in fact, a model selection problem.
First, you could have a look at the contour plots of different copulas
(preferably
Subject: RE: [R] Maximum likelihood estimate of bivariate
vonmises-weibulldistribution
look at the following code:
library(copula)
par(mfrow = c(2, 2))
x - mvdc(normalCopula(sin(0.5 * pi /2)), c(norm, norm),
list(list(mean = 0, sd = 1), list(mean = 0, sd = 1))) contour(x, dmvdc,
xlim = c(-2.7, 2.7
Hi,
I'm dealing with wind data and I'd like to model their distribution in
order to simulate data to fill-in missing values. Wind direction are
typically following a vonmises distribution and wind speeds follow a
weibull distribution. I'd like to build a joint distribution of
directions and
On 5/11/06, Chaouch, Aziz [EMAIL PROTECTED] wrote:
Hi,
I'm dealing with wind data and I'd like to model their distribution in
order to simulate data to fill-in missing values. Wind direction are
typically following a vonmises distribution and wind speeds follow a
weibull distribution. I'd
Andrej Kastrin wrote:
Uwe Ligges wrote:
[EMAIL PROTECTED] wrote:
Hi,
I would like to know how to configure R so that I can enter some values
and compute the Muximum likelihood estimation of my data.
Maximum likelihood estimation of what?
I do not know the definition of Maximum
Hi,
I would like to know how to configure R so that I can enter some values
and compute the Muximum likelihood estimation of my data.
Thanks
Victor.
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PLEASE do read
[EMAIL PROTECTED] wrote:
Hi,
I would like to know how to configure R so that I can enter some values
and compute the Muximum likelihood estimation of my data.
Maximum likelihood estimation of what?
I do not know the definition of Maximum likelihood estimation of [...]
data.
Uwe Ligges
Uwe Ligges wrote:
[EMAIL PROTECTED] wrote:
Hi,
I would like to know how to configure R so that I can enter some values
and compute the Muximum likelihood estimation of my data.
Maximum likelihood estimation of what?
I do not know the definition of Maximum likelihood estimation
Have you considered the Bioconductor project (www.bioconductor.org)?
If you are not already familiar with their capabilities, I suggest you
review their capabilities and consider posting a question to their
listserve if you don't find the answer without that.
hope this
Hello all,
I'm trying to calculate the Maximum likelihood of individuals to get the
ancestry.
I mixd 3 populations 15 generations in proportion of 20% 20% 60% when each
population
sorce have diferent genome (0 1 and 2) with frequencies for each one.
So now i have individuals looks like 0 0 2 1 1
Erez Shabo shaboerez at gmail.com writes:
Hello all,
I'm trying to calculate the Maximum likelihood of individuals to get the
ancestry.
I mixd 3 populations 15 generations in proportion of 20% 20% 60% when each
population
sorce have diferent genome (0 1 and 2) with frequencies for each
I suggest you go to www.r-project.org - CRAN - (select a local
mirror) - Packages. Among the offerings there, you will find the
following:
distr Object orientated implementation of distributions
distrEx Extensions of package distr
distrSimSimulation classes based on package
Hi!
Recently I try to find the method maximum
likelihood for gamma,weibull,Pearson type III,Kappa Distribution,
mixed exponential distribution, skew distribution.
I have tried function ms() for gamma two parameters and weibull two
parameters.It works but not for Pearson type III. I have problem
hi all,
Can anyone tell me how to do Maximum Likelihood Estimation in R?
Thanks in advance
Arun
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Arun Kumar Saha arun.kumar.saha at gmail.com writes:
hi all,
Can anyone tell me how to do Maximum Likelihood Estimation in R?
Unfortunately this question is ***way*** too vague for us
to answer adequately. A short answer is that R provides general-purpose
minimization functions
Dear R-helpers,
Anybody knows which function can I use to comupute maximum likelihood
standard errors?
Using the function nlm I can get the estimate of the parameters of any
likelihood that I want (for example now I am working on a jump diffusion
process) but what about the standard error?
Is
: +32/16/337015
Web: http://www.med.kuleuven.ac.be/biostat/
http://www.student.kuleuven.ac.be/~m0390867/dimitris.htm
- Original Message -
From: Carlo Fezzi [EMAIL PROTECTED]
To: r-help@stat.math.ethz.ch
Sent: Thursday, June 02, 2005 1:43 PM
Subject: [R] maximum likelihood standard
Carlo Fezzi fezzi at stat.unibo.it writes:
Dear R-helpers,
Anybody knows which function can I use to comupute maximum likelihood
standard errors?
Using the function nlm I can get the estimate of the parameters of any
likelihood that I want (for example now I am working on a jump
Roger == Roger D Peng [EMAIL PROTECTED]
on Thu, 14 Oct 2004 17:06:25 -0400 writes:
Roger What lead you to believe that mle() is defunct? It's
Roger still in the `stats4' package in my installation of
Roger R.
yes indeed. Just to clarify possible confusions:
The 'mle'
Since mle is defunct is there anyother function I can use for maximum
likelihood
estimation ?
Thanks ../Murli
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[EMAIL PROTECTED] mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide!
What lead you to believe that mle() is defunct? It's still in the
`stats4' package in my installation of R.
-roger
T. Murlidharan Nair wrote:
Since mle is defunct is there anyother function I can use for maximum
likelihood
estimation ?
Thanks ../Murli
Dear R - users/Helpers
I am dealing with bivariate Normal data with missing values. Further I am trying to
implement Expectation-Maximization (EM) algorithm to resolve the missing data problem.
Now one of the requirements is use the Log likehood function i.e -2Log so as to find
a reliable
On 13-Oct-04 Kunal Shetty wrote:
Dear R - users/Helpers
I am dealing with bivariate Normal data with missing values. Further I
am trying to implement Expectation-Maximization (EM) algorithm to
resolve the missing data problem.
Now one of the requirements is use the Log likehood function
Hi,
-Original Message-
From: [EMAIL PROTECTED] [SMTP:[EMAIL PROTECTED]
Sent: Sunday, February 15, 2004 10:24 PM
To: [EMAIL PROTECTED]; [EMAIL PROTECTED]
Subject: Re: [R] Maximum likelihood estimation in R
Hello,
Use
x=rnorm(100, mean=3, sd=1)
library(MASS
Hello,
Excellent, also the book:
Pawitan, Yudi (2001). In all Likelihood: Statistical Modelling and Inference using
Likelihood, Clarendon Press, Oxford.
Is very good and the associated Web Site is full of MLE using R.
Hope this also helps.
/oal
__
(0.08885297) (0.06281083)
hope this helps. spencer graves
Rau, Roland wrote:
Hi,
-Original Message-
From: [EMAIL PROTECTED] [SMTP:[EMAIL PROTECTED]
Sent: Sunday, February 15, 2004 10:24 PM
To: [EMAIL PROTECTED]; [EMAIL PROTECTED]
Subject:Re: [R] Maximum likelihood
Message-
From: [EMAIL PROTECTED] [SMTP:[EMAIL PROTECTED]
Sent: Sunday, February 15, 2004 10:24 PM
To: [EMAIL PROTECTED]; [EMAIL PROTECTED]
Subject:Re: [R] Maximum likelihood estimation in R
Hello,
Use
x=rnorm(100, mean=3, sd=1)
library(MASS)
fitdistr(x, normal
Dear Sir,
I am a new user of R and I am doing a tast, which is: find the maximum
likelihood estimate of the parameter of Gaussian distribution for generated
100 numbers by using x=rnorm(100, mean=3, sd=1).
I tried to use following Maximum Likelihood function
fn-function(x)
Hello,
Use
x=rnorm(100, mean=3, sd=1)
library(MASS)
fitdistr(x, normal)
mean sd
2.9331 0.99673982
(0.09967398) (0.07048015)
Hope this helps,
Shrieb
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If, however, you are more interested in general methods for
maximizing a likelihood function, I suggest you look at optim, work
the examples on the help page, etc.
hope this helps. spencer graves
[EMAIL PROTECTED] wrote:
Hello,
Use
x=rnorm(100, mean=3, sd=1)
library(MASS)
Or:
library(mle)
?mle
(which, BTW, uses optim() underneath.)
Also, for those not aware of it, fitdistr(x, normal) just computes mean(x)
and (n-1)/n * var(x) and return them. (I can't imagine any reason to do
otherwise for normal distribution.)
Best,
Andy
From: Spencer Graves
If,
Hello,
I want to calculate a maximum likelihood funktion in R in order to solve for the
parameters of an estimator. Is there an easy way to do this in R? How do I get the
parameters and the value of the maximum likelihood funktion.
More, I want to specify the algorithm of the optimisation
To: [EMAIL PROTECTED]
Subject: [R] Maximum Likelihood Estimation and Optimisation
Hello,
I want to calculate a maximum likelihood funktion in R in order to solve for the
parameters of an estimator. Is there an easy way to do this in R? How do I get the
parameters and the value of the maximum
2003 15:43
To: Fohr, Marc [AM]; [EMAIL PROTECTED]
Subject: RE: [R] Maximum Likelihood Estimation and Optimisation
Well, lm() produces an OLS solution, which are also MLE solutions for the
fixed effects. I think this is an easy way, although maybe not the best.
BHHH is a numerical approximation
To: [EMAIL PROTECTED]
Subject: [R] Maximum Likelihood Estimation and Optimisation
Hello,
I want to calculate a maximum likelihood funktion in R in
order to solve for the parameters of an estimator. Is there
an easy way to do this in R? How do I get the parameters and
the value of the maximum likelihood
Hi,
I would like to estimate the parameters of a mixture of two Weibull distributions by
the maximum likelihood method. Is it possible to do it with fitdist?
Thanks
IF
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Hi,
I would like to estimate the parameters of a mixture of two Weibull
distributions by the maximum likelihood method. Is it possible to do it with
fitdist?
Thanks
IF
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