Re: [R-pkg-devel] Compilation used the "non-portable flag"

That definitely makes it easy. Thanks. -Original Message- From: R-package-devel On Behalf Of Ralf Stubner Sent: Friday, May 10, 2019 4:41 PM To: r-package-devel@r-project.org Subject: Re: [R-pkg-devel] Compilation used the "non-portable flag" On 10.05.19 22:32, Goldfeld, Keith wrote: >

Re: [R-pkg-devel] Compilation used the "non-portable flag"

On 10 May 2019 at 20:32, Goldfeld, Keith wrote: | Good afternoon – | | I am submitting an update to my package ‘simstudy’, and the ran the rhub checks. I received a note from one of the four platforms (the other three passed). The Ubuntu Linux 16.04 objected to the compilation flags: | | * ch

Re: [R-pkg-devel] Compilation used the "non-portable flag"

On 10.05.19 22:32, Goldfeld, Keith wrote: > I am submitting an update to my package ‘simstudy’, and the ran the rhub > checks. I received a note from one of the four platforms (the other three > passed). The Ubuntu Linux 16.04 objected to the compilation flags: > > * checking compilation flags u

[R-pkg-devel] Compilation used the "non-portable flag"

Good afternoon – I am submitting an update to my package ‘simstudy’, and the ran the rhub checks. I received a note from one of the four platforms (the other three passed). The Ubuntu Linux 16.04 objected to the compilation flags: * checking compilation flags used ... NOTE Compilation used the

Re: [R-pkg-devel] How to obtain intercept of intercept-only glm in Fortran?

Thanks Ivan for the tip. Are there any examples or links for me to follow through more closely? Thanks, Zhu -Original Message- From: Ivan Krylov Sent: Monday, May 6, 2019 4:14 AM To: Wang, Zhu Cc: R-package-devel@r-project.org Subject: Re: [R-pkg-devel] How to obtain intercept of int

Re: [R-pkg-devel] Problem with using parallel runtime system with R

On Fri, 10 May 2019 at 17:38, Sameh M. Abdulah wrote: > > I will try to talk to my team to fork it for more investigation from your > side. Disclaimer: I'm not saying that I'll have time to have a look. Just that somebody might help if you provide more information, especially the actual code, be

Re: [R-pkg-devel] Problem with using parallel runtime system with R

I meant for anyone who can help :). —Sameh Get Outlook for iOS On Fri, May 10, 2019 at 6:48 PM +0300, "Iñaki Ucar" mailto:iu...@fedoraproject.org>> wrote: On Fri, 10 May 2019 at 17:38, Sameh M. Abdulah wrote: > > I will try to talk to my team to fork it for more inv

Re: [R-pkg-devel] Problem with using parallel runtime system with R

I will try to talk to my team to fork it for more investigation from your side. However, this is the story. We have a C package which uses a STARPU runtime system (http://starpu.gforge.inria.fr/doc/starpu.pdf) to facility the parallelization through a set of task-based parallel algorithms. Once

Re: [R-pkg-devel] R CMD check ERROR (strange to me)

On Fri, 10 May 2019 at 17:30, Dirk Eddelbuettel wrote: > > > On 10 May 2019 at 16:49, Iñaki Ucar wrote: > | On Fri, 10 May 2019 at 15:42, Wang, Zhu wrote: > | > > | > 00install.out > | > > | > ** testing if installed package can be loaded from temporary location > | > ** checking absolute paths

Re: [R-pkg-devel] R CMD check ERROR (strange to me)

On 10 May 2019 at 16:49, Iñaki Ucar wrote: | On Fri, 10 May 2019 at 15:42, Wang, Zhu wrote: | > | > 00install.out | > | > ** testing if installed package can be loaded from temporary location | > ** checking absolute paths in shared objects and dynamic libraries | > mv: cannot move '/media/sf

Re: [R-pkg-devel] R CMD check ERROR (strange to me)

Thanks Iñaki for the tip that helps! Best, Zhu -Original Message- From: Iñaki Ucar Sent: Friday, May 10, 2019 9:50 AM To: Wang, Zhu Cc: Ivan Krylov ; R-package-devel@r-project.org Subject: Re: [R-pkg-devel] R CMD check ERROR (strange to me) On Fri, 10 May 2019 at 15:42, Wang, Zhu wr

Re: [R-pkg-devel] Problem with using parallel runtime system with R

On Fri, 10 May 2019 at 17:06, Sameh M. Abdulah wrote: > > Actually not yet. It is on Github but in a private repo. If it helps I can > fork it for public access for now. Providing the code always improves your chances of getting help. Otherwise, the information is probably too limited. Iñaki _

Re: [R-pkg-devel] Problem with using parallel runtime system with R

Actually not yet. It is on Github but in a private repo. If it helps I can fork it for public access for now. Sameh Get Outlook for iOS On Fri, May 10, 2019 at 5:55 PM +0300, "Iñaki Ucar" mailto:iu...@fedoraproject.org>> wrote: On Fri, 10 May 2019 at 13:48, Sameh M.

Re: [R-pkg-devel] Problem with using parallel runtime system with R

On Fri, 10 May 2019 at 13:48, Sameh M. Abdulah wrote: > Hi, > > I have a C package which includes the usage of the StarPU runtime system to > allow running my code on different HW architectures. I included this to an > R-package and I found that R is using only one core and all the thread > init

Re: [R-pkg-devel] "unable to verify current time" in R CMD check

On Fri, 10 May 2019 at 13:22, Juhee Lee wrote: > > Hi, I'm checking my package for CRAN. > > In fact, I already complete checking CMD in 3.5.3ver. > but for the latest ver., 3.6.0, I get '1 note' when checking CMD. > > I wonder how I can solve this note. > > > checking for future file timestamps

Re: [R-pkg-devel] R CMD check ERROR (strange to me)

On Fri, 10 May 2019 at 15:42, Wang, Zhu wrote: > > 00install.out > > ** testing if installed package can be loaded from temporary location > ** checking absolute paths in shared objects and dynamic libraries > mv: cannot move > '/media/sf_Documents/Zwang/Rpkg/cts.Rcheck/00LOCK-cts/00new/cts' to

Re: [R-pkg-devel] Change in normal random numbers between R 3.5.3 and R 3.6.0

On 10/05/2019 8:55 a.m., Martin Maechler wrote: Ulrike Grömping on Fri, 10 May 2019 06:39:39 +0200 writes: > Mark, > I used > if (getRversion()>="3.6.0") RNGkind(sample.kind="Rounding") > And that works. Actually, using rnorm afterwards also > yields the same ran

Re: [R-pkg-devel] R CMD check ERROR (strange to me)

00install.out ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries mv: cannot move '/media/sf_Documents/Zwang/Rpkg/cts.Rcheck/00LOCK-cts/00new/cts' to '/media/sf_Documents/Zwang/Rpkg/cts.Rcheck/cts': File exist

Re: [R-pkg-devel] Change in normal random numbers between R 3.5.3 and R 3.6.0

> Ulrike Grömping > on Fri, 10 May 2019 06:39:39 +0200 writes: > Mark, > I used > if (getRversion()>="3.6.0") RNGkind(sample.kind="Rounding") > And that works. Actually, using rnorm afterwards also > yields the same random numbers. Yes, "of course", 'sample.kin

Re: [R-pkg-devel] Change in normal random numbers between R 3.5.3 and R 3.6.0

Ulrike, RNGkind() worked on 3.4.1 and 3.6.0 but generated a warning on R 3.5.3. The message follows: checking whether package ‘nprcmanager’ can be installed ... WARNING Found the following significant warnings: Note: possible error in 'RNGkind(sample.kind = "Rounding")': unused argument (sam

[R-pkg-devel] Problem with using parallel runtime system with R

Hi, I have a C package which includes the usage of the StarPU runtime system to allow running my code on different HW architectures. I included this to an R-package and I found that R is using only one core and all the thread initiated by the runtime system is assigned to a single core which i

[R-pkg-devel] "unable to verify current time" in R CMD check

Hi, I'm checking my package for CRAN. In fact, I already complete checking CMD in 3.5.3ver. but for the latest ver., 3.6.0, I get '1 note' when checking CMD. I wonder how I can solve this note. > checking for future file timestamps ... NOTE unable to verify current time Waiting your reply,