Hi All:
I still have problems with checking one of my packages on RHub running Debian,
as the Preprocessing fails in building in some of the needed spatial packages.
This problem was reported quite awhile ago, and never appears to have been
completely fixed. Is there an alternate place I ca
On 4/2/21 1:08 PM, David Winsemius wrote:
On 4/2/21 4:05 AM, Daniel Kelley wrote:
The "oce" package for oceanographic analysis is failing a check on
the r-devel-windows-x86_64-gcc10-UCRT system (see
https://www.r-project.org/nosvn/R.check/r-devel-windows-x86_64-gcc10-UCRT/oce-00check.html).
On 07/04/2021 10:50 a.m., Andrew Dhawan wrote:
Thank you again Uwe,
So, to clarify - is the error occurring because RankProd is not found in
BioC 3.13 (current release is 3.12)? If so, I'm not sure how I can fix
this...
I suspect the only thing you could do in the short term is to remove
tha
Thank you again Uwe,
So, to clarify - is the error occurring because RankProd is not found in
BioC 3.13 (current release is 3.12)? If so, I'm not sure how I can fix
this...
Thanks
Andrew
On Wed, Apr 7, 2021 at 5:45 AM Uwe Ligges
wrote:
>
>
> On 06.04.2021 19:26, Robert M. Flight wrote:
> > A
Reason is that BioC 3.13 does not offer a new rtracklayer binary which
the winbuilder machine typically uses.
As this also does not install from sources for me. So this seems hard to
set up.
Best,
Uwe Ligges
On 07.04.2021 12:18, Rafael CM wrote:
Dear all,
I am trying to submit a packa
ebian:
> sudo apt install libc6-dev
If it's Windows or Mac, I can't help...
If you don't have root access on your host, or the above doesn't make sense
to you, you will need to talk to whoever administers your computing
environment, asking them to install the
If it's Windows or Mac, I can't help...
If you don't have root access on your host, or the above doesn't make sense
to you, you will need to talk to whoever administers your computing
environment, asking them to install the relevant package.
Hope this helps.
Dear all,
I am trying to submit a package to CRAN that depends on Bioconductor
packages. On debian, I do not have any problems so far. But when checking
for windows I get several errors:
Error: package or namespace load failed for 'Gviz' in loadNamespace(j
<- i[[1L]], c(lib.loc, .libPaths()), vers
t install libc6-dev
If it's Windows or Mac, I can't help...
If you don't have root access on your host, or the above doesn't make sense to
you, you will need to talk to whoever administers your computing environment,
asking them to install the relevant package.
Hope this
On 07/04/2021 4:49 a.m., rosario.avo...@unina.it wrote:
Hi everyone,
I hope this is the right e-mail I should have used; this is the first time
that I ask for help with R!
Yesterday, I installed the devel version of R (4.1) as I need to use a
package (RiboDiPa) which only works for this ve
Hi everyone,
I hope this is the right e-mail I should have used; this is the first time
that I ask for help with R!
Yesterday, I installed the devel version of R (4.1) as I need to use a
package (RiboDiPa) which only works for this version.
The package requires, among the others, the package
On 06.04.2021 19:26, Robert M. Flight wrote:
Andrew,
I think if you want to include a Bioconductor dependency, then I think you
add the "biocViews:" line to your description file to enable bioconductor
Not needed for CRAN.
You simply need to declare the dependency, but BioC 3.13 is what we
My DESCRIPTION has the same “SystemRequirements: …” line as salso—from which I
probably copied it.
I had briefly reached out to ‘cargo’ author (who is also ‘salso’ author), who
indicated I might need to supply binaries.
Indeed, on closer look, salso appears to include the binaries, rather than
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