Hello all,
I was using the GUI version of the software to run the tutorial available
in the manual for analysis of relaxation dispersion.
When i execute the run I get the following error
RelaxPipeError: RelaxError: The data pipe 'R2eff - relax_disp (Mon Nov 17
10:50:08 2014)' already exists.
Not
Hi Prem,
Welcome to the relax mailing lists! For the problem you are seeing,
could you please create a bug report for this
(https://gna.org/bugs/?func=additem&group=relax)? Cheers! It would
be good to know what steps you took to encounter this bug, and where
in the analysis the problem occurred
Dear Prem.
Welcome to the mailing list!
I guess that you mean the manual at:
http://www.nmr-relax.com/manual/Contents.html
The relaxation dispersion auto-analysis in the GUI
http://www.nmr-relax.com/manual/The_relaxation_dispersion_auto_analysis_in_the_GUI.html
Where the test data is in:
test_s
Hi Prem.
I added the tutorial here:
http://wiki.nmr-relax.com/Tutorial_for_The_relaxation_dispersion_auto-analysis_in_the_GUI
I tried to take power of the scripting, to get around the tedious work on
defining the experiment settings for all spectra.
So this script should take you to the "end po
Hi Troels and Prem,
Troels, for a suggestion for improving the script in your tutorial,
you could use:
"""
from time import asctime, localtime
pipe_bundle = "relax_disp (%s)" % asctime(localtime())
pipe_name = "origin - %s" % pipe_bundle
"""
This is how the new analysis wizard in relax creates
Hi Troels,
For the tutorial at
http://wiki.nmr-relax.com/Tutorial_for_The_relaxation_dispersion_auto-analysis_in_the_GUI
, I would suggest also adding that relax can be run using OpenMPI to
speed up the relaxation dispersion analysis. So that if you have a
machine with 8 cores and OpenMPI and pyt
Hello Troels and Edwards,
The modified tutorial that you sent me worked fine.
Looks like I might have done some mistake while setting up the run using
the original GUI tutorial for relaxation dispersion. I will try the
original tutorial again to make sure the setup was fine. if the error still
pop
Hello Edward and Troels,
I will take a look at the suggestion and try again. This is the first time
I am using the program for relaxation dispersion analysis. I will also go
through the tutorial one more time to make sure that I went through all the
steps. I will also create the bug reports and se
Hello Edward,
I tried the GUI version of the setup again for the relaxation dispersion
(on the test data) and it ran without any error this time. Its possible I
made some mistake during the setup thr last time.
Thank again for the help
Prem
On Tue, Nov 18, 2014 at 5:27 AM, Edward d'Auvergne
Hi Prem,
From the error message, this is within the automated analysis for
relaxation dispersion. Creating the data pipe 'R2eff - relax_disp
(Mon Nov 17 10:50:08 2014)' can only happen once, as the 'R2eff' model
is only optimised once (there is a loop over all models). There is
only one thing I
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