OK, thanks, I'll try to think about what the problem is. I won't have
a lot of time for the next week, but hopefully after that I can work
on a wider variety of machines.
I'm going to re-cc this to sage-devel in the hopes that someone else
might have some insight - I am not an expert on building
After installing swig, ie.
"sudo apt-get install swig"
and
amd64 build of nifticlib 1.1.0-2 in ubuntu jaunty from
https://launchpad.net/ubuntu/jaunty/amd64/libnifti1-dev/1.1.0-2
and
"sage -i pynifti-p0"
I get:
...
gcc -pthread -shared build/temp.linux-x86_64-2.6/build/src.linux-
x86_64-2.6/n
Can you describe what went wrong when you did "sage -i pynifti-p0"?
Had you downloaded the package? It won't get into the repository
until someone reviews my ticket.
Did you try installing nifticlib when you did it by hand?
Thanks,
Marshall
On Aug 7, 1:23 am, Arvid wrote:
> Thanks for the eff
Thanks for the effort of bringing pynifti (and pymvpa) avaliable.
For me (on Ubuntu 9,04, or Mac Leopard)
$ sage -i pynifti-p0
unfortunately did not work directly. However,
downloading the sources 'pynifti_0.20090303.1.tar.gz' and
'pymvpa_0.4.2.tar.gz', then
$ sage -shand $ make all an
I have a proposed experimental pynifti package, tracked as ticket
#6678:
http://trac.sagemath.org/sage_trac/ticket/6678
-Marshall
On Aug 5, 10:23 pm, Marshall Hampton wrote:
> Maybe this was some sort of path issue I don't understand, but when I
> tried things again it seemed to work, i.e. if
On Thu, Aug 6, 2009 at 7:17 AM, Marshall Hampton wrote:
>
> I have put my spkg up at:
>
> http://sage.math.washington.edu/home/mhampton/pynifti-p0.spkg
>
> I will make a ticket for this to become an experimental spkg.
>
If you made the ticket, you can close it, since I added the above to
experime
I have put my spkg up at:
http://sage.math.washington.edu/home/mhampton/pynifti-p0.spkg
I will make a ticket for this to become an experimental spkg.
-Marshall Hampton
On Aug 5, 10:23 pm, Marshall Hampton wrote:
> Maybe this was some sort of path issue I don't understand, but when I
> tried t
Maybe this was some sort of path issue I don't understand, but when I
tried things again it seemed to work, i.e. if I go into my SAGE_ROOT
folder and use either sage or the sage python, the "import nifti"
works. So what I described above seems to be sufficient, and this
could be made into an spkg
On Wed, Aug 5, 2009 at 8:09 PM, Marshall Hampton wrote:
>
> I gave this a shot but it seems its not trivial to install.
>
> 1) I installed pymvpa with:
>
> pymvpa-0.4.2: sage -python setup.py build_ext
>
> 2) I installed the nifti c libraries with:
>
> nifticlib-1.1.0: make all
>
> 2b) then I copi
I gave this a shot but it seems its not trivial to install.
1) I installed pymvpa with:
pymvpa-0.4.2: sage -python setup.py build_ext
2) I installed the nifti c libraries with:
nifticlib-1.1.0: make all
2b) then I copied everything in the bin, lib, and include directories
into the correspondi
On Aug 5, 8:36 pm, Arvid wrote:
> Will it be possible to incorporate access to NIfTI and ANALYZE files
> in SAGE through PyNIfTI (http://niftilib.sourceforge.net/pynifti/)?
Hi, I can't access the sourceforge website right now, but it is "easy"
to install additional python packages in sage. They
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