I checked in the updates digestdb sources yesterday to the Sashimi
SourceForge repository that will allow you to specify modified
residues. You can download a compiled windows binary here:
http://proteomicsresource.washington.edu/dist/digestdb.exe
The command line option to specify the mods is
Thanks Matt, after installing the .NET FW msConvert worked perfectly.
Can you tell me how to post directly to the proteowizard-support list?
On Apr 28, 5:43 pm, Matthew Chambers
wrote:
> Do you have the .NET framework 3.5 SP1 installed?
>
> -Matt
>
> On 4/28/2011 4:17 PM, Ronald W. Finnegan wro
Thanks for your help Eric, I will download msconvert.
L.
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Do you have the .NET framework 3.5 SP1 installed?
-Matt
On 4/28/2011 4:17 PM, Ronald W. Finnegan wrote:
The manifest file is 4KB.
On Apr 28, 5:09 pm, Matthew Chambers
wrote:
My Reply-To is feeling neglected. :(
Can you give me the file size of the MSFileReader.XRawfile2.SxS.manifest file?
The manifest file is 4KB.
On Apr 28, 5:09 pm, Matthew Chambers
wrote:
> My Reply-To is feeling neglected. :(
>
> Can you give me the file size of the MSFileReader.XRawfile2.SxS.manifest file?
>
> Thanks,
> -Matt
>
> On 4/28/2011 4:01 PM, Ronald W. Finnegan wrote:
>
>
>
>
>
> > Yes, I extracted al
My Reply-To is feeling neglected. :(
Can you give me the file size of the MSFileReader.XRawfile2.SxS.manifest file?
Thanks,
-Matt
On 4/28/2011 4:01 PM, Ronald W. Finnegan wrote:
Yes, I extracted all of the from the tar.biz files into a single
folder called PWiz and placed my raw files in the
Yes, I extracted all of the from the tar.biz files into a single
folder called PWiz and placed my raw files in the same folder.
On Apr 28, 4:53 pm, Matthew Chambers
wrote:
> OK this time I'll set the reply-to field appropriately. :)
>
> Did you extract all the files from the tar.bz into the sam
OK this time I'll set the reply-to field appropriately. :)
Did you extract all the files from the tar.bz into the same directory?
-Matt
On 4/28/2011 3:51 PM, Ronald W. Finnegan wrote:
Yes, I get the same error when I run msconvert without any arguments.
How do I access the proteowizard suppo
Yes, I get the same error when I run msconvert without any arguments.
How do I access the proteowizard support list?
On Apr 28, 4:46 pm, Matthew Chambers
wrote:
> Hi Ronald,
>
> Moving to proteowizard-support list.
>
> Do you get the same error when you run msconvert without any arguments?
>
> -
Hi Ronald,
Moving to proteowizard-support list.
Do you get the same error when you run msconvert without any arguments?
-Matt
On 4/28/2011 2:35 PM, Ronald W. Finnegan wrote:
I am trying to use Pwiz (pwiz-bin-windows-x86-vc90-release-2_1_2661)
on an XP machine to convert velos raw files to mz
I am trying to use Pwiz (pwiz-bin-windows-x86-vc90-release-2_1_2661)
on an XP machine to convert velos raw files to mzXML. I was able to
install the Thermo msfilereader but when I run msconvert --mzXML
velos.raw an error is generated: Application failed to initialize.
Any suggestions?
BTW, neit
Dear Group,
the new Mascot Server allows users to search multiple sequence
databases in a single search.
I was wondering if there were any issues with Mascot2Xml converting
the '.dat' result file of such a search?
(I am yet to produce such a .dat file, but will it ignore any entry
not found in the
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