I checked in the updates digestdb sources yesterday to the Sashimi SourceForge repository that will allow you to specify modified residues. You can download a compiled windows binary here: http://proteomicsresource.washington.edu/dist/digestdb.exe
The command line option to specify the mods is -M. For example, digestdb.exe -M57.0@C,16.0@M file.fasta On Tue, Apr 26, 2011 at 6:16 AM, Amit Yadav <amit007thech...@gmail.com> wrote: > I am using digestdb.exe program that comes with TPP installation. I was > wondering how to configure fixed modifications. > > Regards, > > Amit Kumar Yadav > Senior Research Fellow (SRF-CSIR) > IGIB, New Delhi (India) > > MassWiz Web server > MassWiz sourceforge project > MassWiki > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to spctools-discuss@googlegroups.com. > To unsubscribe from this group, send email to > spctools-discuss+unsubscr...@googlegroups.com. > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to spctools-discuss@googlegroups.com. To unsubscribe from this group, send email to spctools-discuss+unsubscr...@googlegroups.com. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
