Hi Sud,
I think you can do that with excel. Select the cells that have the modified
peptides. Use the find and replace option to find" [147.04] " and replace
it with nothing, i.e. just leave the replace box empty.
That should be enough to take out the modification from the peptide
sequence.
I
Hello Mehar,
It seems that there was an issue with reading your user session cookie --
perhaps you followed an old link, reinstalled TPP while logged in, or your
browser does not support cookies.
I suggest starting a new browser session and try to run TPP again; let us
know if the issue persists.
Thank you. I will try that.
Em ter., 15 de dez. de 2020 às 01:52, sudarshan kumar <
kumarsuders...@gmail.com> escreveu:
> I feel like there is a problem in your conversion.
> Better, validate the search parameters (which you are using at present)
> with some *known (may be in you lab old data
Hello Sudarshan,
Did the program report any messages when it ran? Are you certain that the
PeptideProphet input going to iProphet contains PSMs with non-zero
probabilities?
Thanks,
-David
On Mon, Dec 14, 2020 at 9:58 PM sudarshan kumar
wrote:
> I have analyzed a data file using peptide
