s.com] On Behalf Of hw
Sent: Tuesday, April 12, 2011 5:15 AM
To: spctools-discuss
Subject: [spctools-discuss] MassWolf MSe data
I have trouble to convert Masslynx's MSe data file to mzXML then
to .mgf file with TPP. Here is the command I used:
masswolf --mzXML --nolockspray --MSe C:\
The problem is likely due to MSe spectra not being labeled as MS level
2 scans (ms/ms scans) in the mzXML file. Look for "msLevel="
attribute in the file to see what MS level is assigned to these
spectra. If I had to guess, they are considered MS level 1 scans and
no distinction is made between l
I have trouble to convert Masslynx's MSe data file to mzXML then
to .mgf file with TPP. Here is the command I used:
masswolf --mzXML --nolockspray --MSe C:\data.raw C:\data.mzXML
The output file data.mzXML can be viewed with InsilicoView and it
looked ok. However, when TPP was used to convert .dat
