Thank you.
A co-worker with a windows machine tried the ProtXMLViewer with the GUI.
However, I'm confused that the output doesn't include a total number or
number of unique peptides or something similar - just "tot indep spectra"
and "percent share of spectrum ids". Is there a good way to get
Hi Emma,
The ProtXMLViewer is under the cgi-bin/ directory of the image. However,
the version in 6.2.0 does not have the command-line capability of exporting
protXML to TSV. We introduced this feature in 6.3.0, and will be available
once we produce the related image. (well, after fixing some
Hi,
I am running TPP 6.2.0 via a singularity image. I have been using the
EXCELXX option in ProteinProphet to a tab-separated file. However, that is
for some reason not working at the moment (tried today and yesterday). I
tried to also use ProtXMLViewer.pl but it doesn't seem to exist in the
