Re: [spctools-discuss] mzIDentML

2020-02-04 Thread 2kl...@gmail.com
Thanks a lot Mike! On Tuesday, February 4, 2020 at 11:45:22 PM UTC+2, Michael Hoopmann wrote: > > Hi, > > > > I can shed some light on the mzIdentML support. Regarding the > fragmentation information, it isn’t in the mzID file because it isn’t in > the pepXML file. tpp2mzid can only convert

RE: [spctools-discuss] mzIDentML

2020-02-04 Thread 'Michael Hoopmann' via spctools-discuss
Hi, I can shed some light on the mzIdentML support. Regarding the fragmentation information, it isn’t in the mzID file because it isn’t in the pepXML file. tpp2mzid can only convert values it is given as input. The dimethylated peptide error messages might be only a minor concern indicat