[Tutor] R: Tutor Digest, Vol 131, Issue 60 order loop from methos on class

2015-01-26 Thread jarod...@libero.it
dear all, thanks so much!! I explain better my problem :http://pastebin.com/iiPZMi2U this is my workflow. Take my data from readset an create a command list ena = Rnaseq() The order of the self.step are the order I wan to to execute my analisys. So this is the order: In [160]: ena.show() 1-

Re: [Tutor] R: Tutor Digest, Vol 131, Issue 60 order loop from methos on class

2015-01-26 Thread Danny Yoo
Hello, The order of the self.step are the order I wan to to execute my analisys. So this is the order: In [160]: ena.show() 1- trimmomatic 2- merge_trimmomatic_stats 3- star 4- picard_sort_sam 5- rnaseqc 6- wiggle 7- cufflinks 8- cuffquant 9- gq_seq_utils_exploratory_analysis_rnaseq