Re: [gridengine users] SGE 6.2u5 qstat reports: mem=0.00000 GBs vmem=N/A, maxvmem=N/A

Hi Fabio, do you have global config, qmaster_params, SHARETREE_RESERVED_USAGE configured? In this case sge_execd doesn't report the actual values, but - wallclock * number of slots as cpu and - requested memory * number of slos * wallclock as mem. If a job has no memory request I would

Re: [gridengine users] qmake retry after connection error

Hi Ido, Ido Tamir wrote: Hi, we use qmake to parallelize the illumina/solexa pipeline. Its a make based system that operates on many files to generate some output. However, often under load we get errors like: error: commlib error: got select error (Connection reset by peer) error: executing

Re: [gridengine users] Spooling for a shadow master...

Hi James, there are the following spooling options if you want to setup sge_shadowd: * classic spooling on nfs (or nfs4) * Berkeley DB spooling on nfs4 * Berkeley DB RPC server (still available in Grid Engine 6.2u5, but no longer supported with Univa Grid Engine 8.0.0) With your

Re: [gridengine users] [gridengine dev] building on centos 5.5 64 bit?

Hi Chris, we will be shipping Berkeley DB 4.4.20 with the 8.0.0 - to be compatible with 6.2u5 systems. We dropped support for the Berkeley DB RPC server (berkeley_db_svc) though. It is no longer supported in current versions of Berkeley DB (IIRC starting with 4.8). Regarding your issue