Re: [OMPI users] exited on signal 11 (Segmentation fault).

2011-10-26 Thread Mouhamad Al-Sayed-Ali
Hi Gus; I have done as uou suggest me but it always doesn't work! Many thanks for your help Mouhamad Gus Correa a écrit : Hi Mouhamad Stack of 10240kB is probably the Linux default, not necessarily good for HPC and number crunching. I'd suggest that you change it to unlimited, unless you

[OMPI users] Want to find LogGP parameters. Please help

2011-10-26 Thread Mudassar Majeed
> is finding a different installation than the one in /usr. > > > On Oct 26, 2011, at 3:11 AM, Patrick Begou wrote: > >> I need to change system wide how OpenMPI launch the jobs on the nodes of my >> cluster. >> >> Setting: >> export OMPI_MCA_plm_rsh

[OMPI users] Solved: Visual debugging on the cluster

2011-10-26 Thread devendra rai
Hello Meredith Hmm.. Got my X forwarding to work, so can debug on multiple computers. So far, so good! Marking the problem as solved. Thanks for your time. Best Devendra Rai From: Meredith Creekmore To: devendra rai Sent: Tuesday, 25 October 2011, 18:06 Sub

Re: [OMPI users] exited on signal 11 (Segmentation fault).

2011-10-26 Thread Gus Correa
Hi Mouhamad Stack of 10240kB is probably the Linux default, not necessarily good for HPC and number crunching. I'd suggest that you change it to unlimited, unless your system administrator has a very good reason not to do so. We've seen many atmosphre/ocean/climate models crash because they could

Re: [OMPI users] Changing plm_rsh_agent system wide

2011-10-26 Thread Patrick Begou
Ralph Castain a écrit : Did the version you are running get installed in /usr? Sounds like you are picking up a different version when running a command - i.e., that your PATH is finding a different installation than the one in /usr. Right! I'm using OpenMPI with Rocks Cluster distribution. T

Re: [OMPI users] Changing plm_rsh_agent system wide

2011-10-26 Thread TERRY DONTJE
Sorry please disregard my reply to this email. :-) --td On 10/26/2011 10:44 AM, Ralph Castain wrote: Did the version you are running get installed in /usr? Sounds like you are picking up a different version when running a command - i.e., that your PATH is finding a different installation tha

Re: [OMPI users] Changing plm_rsh_agent system wide

2011-10-26 Thread TERRY DONTJE
I am using prefix configuration so no it does not exist in /usr. --td On 10/26/2011 10:44 AM, Ralph Castain wrote: Did the version you are running get installed in /usr? Sounds like you are picking up a different version when running a command - i.e., that your PATH is finding a different ins

Re: [OMPI users] Changing plm_rsh_agent system wide

2011-10-26 Thread Ralph Castain
Did the version you are running get installed in /usr? Sounds like you are picking up a different version when running a command - i.e., that your PATH is finding a different installation than the one in /usr. On Oct 26, 2011, at 3:11 AM, Patrick Begou wrote: > I need to change system wide how

Re: [OMPI users] Checkpoint from inside MPI program with OpenMPI 1.4.2 ?

2011-10-26 Thread Josh Hursey
Since this would be a new feature for 1.4, we cannot move it since the 1.4 branch is for bug fixes only. However, we may be able to add it to 1.5. I filed a ticket if you want to track that progress: https://svn.open-mpi.org/trac/ompi/ticket/2895 -- Josh On Tue, Oct 25, 2011 at 11:52 PM, Nguye

[OMPI users] Changing plm_rsh_agent system wide

2011-10-26 Thread Patrick Begou
I need to change system wide how OpenMPI launch the jobs on the nodes of my cluster. Setting: export OMPI_MCA_plm_rsh_agent=oarsh works fine but I would like this config to be the default with OpenMPI. I've read several threads (discussions, FAQ) about this but none of the provided solutions

Re: [OMPI users] exited on signal 11 (Segmentation fault).

2011-10-26 Thread Mouhamad Al-Sayed-Ali
Hi Gus Correa, the output of ulimit -a is file(blocks) unlimited coredump(blocks) 2048 data(kbytes) unlimited stack(kbytes)10240 lockedmem(kbytes)unlimited memory(kbytes) unlimited nofiles(descriptors) 1024 processes256 Than

Re: [OMPI users] Checkpoint from inside MPI program with OpenMPI 1.4.2 ?

2011-10-26 Thread Nguyen Toan
Dear Josh, Thank you. I will test the 1.7 trunk as you suggested. Also I want to ask if we can add this interface to OpenMPI 1.4.2, because my applications are mainly involved in this version. Regards, Nguyen Toan On Wed, Oct 26, 2011 at 3:25 AM, Josh Hursey wrote: > Open MPI (trunk/1.7 - not