Re: [OMPI users] Problem when installing Rmpi package in HPC cluster

2016-07-11 Thread pan yang
Dear Gilles, I tried export OMPI_MCA_pml=ob1, and it worked! Thank you very much for your brilliant suggestion. By the way, I don't really understand what do you mean by '*can you also extract the command tha launch the test ?*'... Cheers, Pan

[OMPI users] Problem when installing Rmpi package in HPC cluster

2016-07-11 Thread pan yang
Dear OpenMPI community, I faced this problem when I am installing the Rmpi: > install.packages('Rmpi',repos='http://cran.r-project.org ',configure.args=c( + '--with-Rmpi-include=/usr/mpi/gcc/openmpi-1.8.2/include/', + '--with-Rmpi-libpath=/usr/mpi/gcc/openmpi-1.8.2/lib64/', +