Hi,

I'm developing some days on this project. I have the basics now, but there is 
one problem I have, and I can't find my mistake. 

Here there is the code: http://filip.hasecke.com/molekuel-program/view

When starting run.py there should be a ring of 6 C-Atoms, this ring has a 
crack in it. I don't know why, either my Vectors for the depiction of the 
bindings or the connection_points have wrong values. I can't find the 
mistake.


Happy for all help.

TIA, Filip

P.S. Souvarine: The matrix works well. Thanks for your help.

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