Hi, somehow my installation has not completed. It is not only the gui that is not accessible through the browser, none of the commandlines 'work' either.
------------------ output from 'make install': ----------------------- # Create Directories mkdir -p /usr/local/apps/tpp/ mkdir -p /usr/local/apps/tpp/bin/ mkdir -p /usr/local/apps/tpp/cgi-bin/ mkdir -p /usr/local/apps/tpp/schema/ # Copy all source executables and configuration files to their location cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ ASAPRatioPeptideParser /usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ ASAPRatioProteinRatioParser /usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ ASAPRatioPvalueParser /usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/batchcoverage /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/Comet2XML /usr/local/ apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/CompactParser /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/DatabaseParser /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ EnzymeDigestionParser /usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/InteractParser /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/LibraPeptideParser / usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ LibraProteinRatioParser /usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/Mascot2XML /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ PeptideProphetParser /usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/InterProphetParser / usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ProteinProphet /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/TPPVersionInfo.pl / usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/TPPVersionInfo.pl / usr/local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/StatUtilities.pm / usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/calctppstat.pl /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/StatUtilities.pm / usr/local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/calctppstat.pl /usr/ local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/tpp_hostname /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/tpp_hostname /usr/ local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/SSRCalc3.pl /usr/ local/apps/tpp/bin/ # SSRCalc3.par doesn't need to be rewriten and is in the src tree, not build stage dir cp -f ../perl/SSRCalc3.par /usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/filterMRM.pl /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/replaceall.pl /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/updateAllPaths.pl / usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/createChargeFile.pl / usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/mergeCharges.pl /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ProphetModels.pl / usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/compareProts.pl /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ProtProphModels.pl / usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/RefreshParser /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/MzXML2Search /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/runperl /usr/local/ apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/Sequest2XML /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/Out2XML /usr/local/ apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/Sqt2XML /usr/local/ apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/CombineOut /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/Tandem2XML /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/xinteract /usr/local/ apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/XPressPeptideParser / usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ XPressProteinRatioParser /usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ Q3ProteinRatioParser /usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/spectrast /usr/local/ apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/plotspectrast /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/Lib2HTML /usr/local/ apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/runsearch /usr/local/ apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/dtafilter /usr/local/ apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/readmzXML /usr/local/ apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/indexmzXML /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/dta2mzxml /usr/local/ apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/msconvert /usr/local/ apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/out2summary /usr/ local/apps/tpp/bin/ # to be retired in favor of out2xml cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/pep_dbcount /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/digestdb /usr/local/ apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/subsetdb /usr/local/ apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/translateDNA2AA- FASTA /usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/calculate_pi /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/add_mz /usr/local/ apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/TPPVersionInfo.pl / usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/decoyFASTA /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/tpplib_perl.pm /usr/ local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/tpplib_perl.pm /usr/ local/apps/tpp/bin/ # copying tandem executable and support files to installed bin directory cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/tandem.exe /usr/ local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ isb_default_input_kscore.xml /usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ isb_default_input_native.xml /usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/tandem_params.xml / usr/local/apps/tpp/bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/taxonomy.xml /usr/ local/apps/tpp/bin/ # replace the default_input.xml path in Tandem's params file #sed -i 's?_DEFAULT_INPUT_LOCATION_/?/usr/local/apps/tpp/bin/?g' /usr/ local/apps/tpp/bin/tandem_params.xml cp -f ../schema/msms_analysis3.dtd /usr/local/apps/tpp/schema/ cp -f ../schema/pepXML_std.xsl /usr/local/apps/tpp/schema/ cp -f ../schema/pepXML_v110.xsd /usr/local/apps/tpp/schema/ cp -f ../schema/pepXML_v111.xsd /usr/local/apps/tpp/schema/ cp -f ../schema/pepXML_v112.xsd /usr/local/apps/tpp/schema/ cp -f ../schema/pepXML_v113.xsd /usr/local/apps/tpp/schema/ cp -f ../schema/pepXML_v9.xsd /usr/local/apps/tpp/schema/ cp -f ../schema/protXML_v1.xsd /usr/local/apps/tpp/schema/ cp -f ../schema/protXML_v3.xsd /usr/local/apps/tpp/schema/ cp -f ../schema/protXML_v4.xsd /usr/local/apps/tpp/schema/ cp -f ../schema/protXML_v5.xsd /usr/local/apps/tpp/schema/ cp -f ../schema/protXML_v6.xsd /usr/local/apps/tpp/schema/ chmod g+x /usr/local/apps/tpp/bin/* chmod a+r /usr/local/apps/tpp/schema/* # Create Directories mkdir -p /usr/local/apps/tpp/cgi-bin/ mkdir -p /usr/local/apps/tpp/etc/ mkdir -p /usr/local/apps/tpp/html/ # HELP_DIR is the same as HTML_DIR for default installations if [ ! -e /usr/local/apps/tpp/html/ ]; then mkdir -p /usr/local/apps/ tpp/html/; fi; # HELP_DIR is the same as HTML_DIR for default installations if [ ! -e /usr/local/apps/tpp/html//images ]; then mkdir -p /usr/local/ apps/tpp/html//images; fi; # Call make recursively make -C ../CGI/ install make[1]: Entering directory `/usr/local/src/tpp-4.3.0/CGI' cp -f ../src/../build/linux/show_tmp_pngfile.pl /usr/local/apps/tpp/ cgi-bin/ cp -f ../src/../build/linux/findsubsets.pl /usr/local/apps/tpp/cgi- bin/ cp -f ../src/../build/linux/mascotout.pl /usr/local/apps/tpp/cgi-bin/ cp -f ../src/../build/linux/more_anal.pl /usr/local/apps/tpp/cgi-bin/ cp -f ../src/../build/linux/more_pepanal.pl /usr/local/apps/tpp/cgi- bin/ cp -f ../src/../build/linux/peptidexml_html2.pl /usr/local/apps/tpp/ cgi-bin/ cp -f ../src/../build/linux/pepxml2html.pl /usr/local/apps/tpp/cgi- bin/ cp -f ../src/../build/linux/pepxml2html.pl /usr/local/apps/tpp/bin/ cp -f ../src/../build/linux/prot_wt_xml.pl /usr/local/apps/tpp/cgi- bin/ cp -f ../src/../build/linux/protxml2html.pl /usr/local/apps/tpp/cgi- bin/ cp -f ../src/../build/linux/protxml2html.pl /usr/local/apps/tpp/bin/ cp -f ../src/../build/linux/show_dataset_derivation.pl /usr/local/apps/ tpp/cgi-bin/ cp -f ../src/../build/linux/show_help.pl /usr/local/apps/tpp/cgi-bin/ cp -f ../src/../build/linux/show_nspbin.pl /usr/local/apps/tpp/cgi- bin/ cp -f ../src/../build/linux/show_pepdataset_derivation.pl /usr/local/ apps/tpp/cgi-bin/ cp -f ../src/../build/linux/show_pipeline_help.pl /usr/local/apps/tpp/ cgi-bin/ cp -f ../src/../build/linux/show_search_params.pl /usr/local/apps/tpp/ cgi-bin/ cp -f ../src/../build/linux/show_sens_err.pl /usr/local/apps/tpp/cgi- bin/ cp -f ../src/../build/linux/check_env.pl /usr/local/apps/tpp/cgi-bin/ cp -f ../src/../build/linux/tpp_gui.pl /usr/local/apps/tpp/cgi-bin/ if [ ! -e /usr/local/apps/tpp/cgi-bin//tpp_gui_config.pl ]; then cp -f tpp_gui/tpp_gui_config.pl /usr/local/apps/tpp/cgi-bin/ ; fi; cp -f tpp_gui/tpp_gui.css /usr/local/apps/tpp/cgi-bin/ mkdir -p /usr/local/apps/tpp/cgi-bin//images cp -f tpp_gui/*.png /usr/local/apps/tpp/cgi-bin//images cp -f tpp_gui/*.jpg /usr/local/apps/tpp/cgi-bin//images cp -f tpp_gui/*.gif /usr/local/apps/tpp/cgi-bin//images cp -f ../installer_win32/*.ico /usr/local/apps/tpp/cgi-bin//images mkdir -p /usr/local/apps/tpp/cgi-bin/users/ cp -rfu tpp_gui/users/* /usr/local/apps/tpp/cgi-bin/users/ make[1]: Leaving directory `/usr/local/src/tpp-4.3.0/CGI' make -C ../COVERAGE/ install make[1]: Entering directory `/usr/local/src/tpp-4.3.0/COVERAGE' cp -f ../src/../build/linux/batchcoverage /usr/local/apps/tpp/bin/ make[1]: Leaving directory `/usr/local/src/tpp-4.3.0/COVERAGE' make -C ../HELP_DIR/ install make[1]: Entering directory `/usr/local/src/tpp-4.3.0/HELP_DIR' cp pep-proph.jpg /usr/local/apps/tpp/html/ cp prot-proph.jpg /usr/local/apps/tpp/html/ cp protxml_help00.png /usr/local/apps/tpp/html/ cp protxml_help010.png /usr/local/apps/tpp/html/ cp protxml_help0115.png /usr/local/apps/tpp/html/ cp protxml_help01.png /usr/local/apps/tpp/html/ cp protxml_help02.png /usr/local/apps/tpp/html/ cp protxml_help03.png /usr/local/apps/tpp/html/ cp protxml_help04.png /usr/local/apps/tpp/html/ cp protxml_help05.png /usr/local/apps/tpp/html/ cp protxml_help06.png /usr/local/apps/tpp/html/ cp protxml_help07.png /usr/local/apps/tpp/html/ cp protxml_help085.png /usr/local/apps/tpp/html/ cp protxml_help086.png /usr/local/apps/tpp/html/ cp protxml_help087.png /usr/local/apps/tpp/html/ cp protxml_help08.png /usr/local/apps/tpp/html/ cp protxml_help.png /usr/local/apps/tpp/html/ cp pipeline_help10.png /usr/local/apps/tpp/html/ cp pipeline_help12.png /usr/local/apps/tpp/html/ cp pipeline_help1.png /usr/local/apps/tpp/html/ cp pipeline_help3.png /usr/local/apps/tpp/html/ cp pipeline_help5.png /usr/local/apps/tpp/html/ cp pipeline_help7.png /usr/local/apps/tpp/html/ cp pipeline_help9.png /usr/local/apps/tpp/html/ cp pipeline_help11.png /usr/local/apps/tpp/html/ cp pipeline_help13.png /usr/local/apps/tpp/html/ cp pipeline_help2.png /usr/local/apps/tpp/html/ cp pipeline_help4.png /usr/local/apps/tpp/html/ cp pipeline_help6.png /usr/local/apps/tpp/html/ cp pipeline_help8.png /usr/local/apps/tpp/html/ make[1]: Leaving directory `/usr/local/src/tpp-4.3.0/HELP_DIR' make -C ../HTML/ install make[1]: Entering directory `/usr/local/src/tpp-4.3.0/HTML' cp post_to_spectrast.html /usr/local/apps/tpp/html/ make[1]: Leaving directory `/usr/local/src/tpp-4.3.0/HTML' make -C ../images/ install make[1]: Entering directory `/usr/local/src/tpp-4.3.0/images' Makefile:6: warning: overriding commands for target `default' ../src/Makefile.incl:256: warning: ignoring old commands for target `default' cp spectrast_tiny.png /usr/local/apps/tpp/html//images chmod 775 /usr/local/apps/tpp/html//images/spectrast_tiny.png cp pa_tiny.png /usr/local/apps/tpp/html//images chmod 775 /usr/local/apps/tpp/html//images/pa_tiny.png cp qMark.png /usr/local/apps/tpp/html//images chmod 775 /usr/local/apps/tpp/html//images/qMark.png make[1]: Leaving directory `/usr/local/src/tpp-4.3.0/images' #PepXMLViewer make -C Visualization/PepXMLViewer/ install-linux make[1]: Entering directory `/usr/local/src/tpp-4.3.0/src/ Visualization/PepXMLViewer' mkdir -p /usr/local/apps/tpp/html/css chmod a+x /usr/local/apps/tpp/html/css mkdir -p /usr/local/apps/tpp/html/js chmod a+x /usr/local/apps/tpp/html/js cp -f ../../../build/linux/PepXMLViewer.cgi /usr/local/apps/tpp/cgi- bin/ cp -f html/css/*.css /usr/local/apps/tpp/html/css chmod a+r /usr/local/apps/tpp/html/css/*.css cp -f html/js/*.js /usr/local/apps/tpp/html/js chmod a+r /usr/local/apps/tpp/html/js/*.js cp -f html/*.html /usr/local/apps/tpp/html/ chmod a+r /usr/local/apps/tpp/html/*.html make[1]: Leaving directory `/usr/local/src/tpp-4.3.0/src/Visualization/ PepXMLViewer' # Copy all source executables and configuration files to their location cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ AnalysisSummaryParser.cgi /usr/local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ASAPCGIDisplay.cgi / usr/local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ ASAPRatioPeptideCGIDisplayParser.cgi /usr/local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/comet-fastadb.cgi / usr/local/apps/tpp/cgi-bin/ cp -f Visualization/Comet/cometlinks.def /usr/local/apps/tpp/etc/ cp -f Visualization/Comet/tryp_model.txt /usr/local/apps/tpp/html/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/disCidData_xml.cgi / usr/local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/getCidData_xml.cgi / usr/local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ModelParser.cgi /usr/ local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/Pep3D_xml.cgi /usr/ local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/plot-msms.cgi /usr/ local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/dta-xml.cgi /usr/ local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/sequest-tgz-out.cgi / usr/local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/cometresult.cgi /usr/ local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/xpress-prophet- update.cgi /usr/local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ XPressCGIProteinDisplayParser.cgi /usr/local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/ XPressPeptideUpdateParser.cgi /usr/local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/plotspectrast.cgi / usr/local/apps/tpp/cgi-bin/ cp -f /usr/local/src/tpp-4.3.0/src/../build/linux/TPPVersionInfo.pl / usr/local/apps/tpp/cgi-bin/ chmod a+x /usr/local/apps/tpp/cgi-bin/* chmod -R a+rw /usr/local/apps/tpp/cgi-bin/users/ chmod a+r /usr/local/apps/tpp/html/* ---------------------------------------------------------------------------------- Best wishes, Achim On Aug 25, 6:32 pm, Joe Slagel <jsla...@systemsbiology.org> wrote: > Hi Achim, > > I've run into something like this a couple of times before. What I've found > is that when you set the location in your > Makefile.config.incl(Makefile.config) its important to have a trailing "/" > on the TPP_ROOT and TPP_WEB variables.. > > -Joe > > > > On Tue, Aug 25, 2009 at 3:56 AM, achimt <achim.treum...@gmail.com> wrote: > > > Dear all, > > > I am in the process of trying to install TPP 4.3.0 on ubuntu 9.04. > > THanks to the help of Natalie and Joe, I managed to compile everything > > correctly (I think :-). However, when I am setting ub things, I come > > across the following stumbling block: > > > In the installation script it says (in the section about configuring > > apache): > > > ---------------------- from 'install-ubuntu-9_04.sh' > > --------------------------- > > # directory to store data for web browser viewing > > ScriptAlias /tpp/data "/usr/local/apps/tpp/data" > > <Directory "/usr/local/apps/tpp/data"> > > AllowOverride None > > Options Indexes FollowSymLinks Includes > > Order allow,deny > > Allow from all > > </Directory> > > > # directory for tpp's html resources (css, js, images, etc) > > ScriptAlias /tpp/html "/usr/local/apps/tpp/html" > > <Directory "/usr/local/apps/tpp/html"> > > AllowOverride None > > Options Includes Indexes FollowSymLinks MultiViews > > Order allow,deny > > Allow from all > > </Directory> > > > # directory for tpp's schema resources > > <Directory "/usr/local/apps/tpp/schema"> > > AllowOverride None > > Options Includes Indexes FollowSymLinks MultiViews > > Order allow,deny > > Allow from all > > </Directory> > > > # directory for tpp's executable files > > ScriptAlias /tpp/cgi-bin "/usr/local/apps/tpp/cgi-bin" > > <Directory "/usr/local/apps/tpp/cgi-bin"> > > #AllowOverride AuthConfig Limit > > AllowOverride All > > Options Indexes FollowSymLinks MultiViews ExecCGI > > +Includes > > AddHandler default-handler .jpg .png .css .ico .gif > > AddHandler cgi-script .cgi .pl > > Order allow,deny > > Allow from all > > SetEnv WEBSERVER_ROOT /usr/local/apps > > #SetEnv WEBSERVER_ROOT /var/www > > </Directory> > > ------------------------ end ------------------------------------- > > > However, when I look at /usr/local/apps, I see the following > > directories: > > > ------------------------ terminal output -------------------------- > > ac...@linux01:/usr/local/apps$ ll > > total 24 > > drwxr-xr-x 2 root root 4096 2009-08-24 11:13 tpp > > drwxr-xr-x 2 root root 4096 2009-08-24 11:13 tppbin > > drwxr-xr-x 4 root root 4096 2009-08-24 11:13 tppcgi-bin > > drwxr-xr-x 2 root root 4096 2009-08-24 11:13 tppetc > > drwxr-xr-x 5 root root 4096 2009-08-24 11:13 tpphtml > > drwxr-xr-x 2 root root 4096 2009-08-24 11:13 tppschema > > ------------------------ end terminal output ------------------- > > > Does this indicate that I have done something wrong during the > > installation process or that the file structure might have changed > > slightly, without this being reflected in the installation script? > > > Your help is very much appreciated, > > > Achim > > -- > Joe Slagel > Institute for Systems Biology > jsla...@systemsbiology.org > (206) 732-1362 --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "spctools-discuss" group. 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