unless there's a way to convert .msf to pep.xml, and I'm not aware of any tool that does this, you'll have to go the .out route.
On Mar 3, 2:18 pm, Ping <yanpp...@gmail.com> wrote: > Hi All, > > The output of the Proteome Discover is *.msf. Is there an easy way to > compute peptide prophet from it? Or I have to run sequest.exe to get > *.out to do so? > > Thanks! > > Ping -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to spctools-disc...@googlegroups.com. To unsubscribe from this group, send email to spctools-discuss+unsubscr...@googlegroups.com. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
