Daniel, The issue you're seeing might be due to TPP windows programs compiled as 32-bit binaries. The first thing I'd try is grabbing a 64-bit binary of one of the tools to see if that fixes things. You can grab a 64-bit Comet binary from its SourceForge download site if you want to test this. I wish I could tell you definitively that the 64-bit Comet binary will work for you but I just don't have access to files >2GB to test with.
On Fri, Oct 9, 2015 at 11:09 AM, Daniel Hyduke <danielhyd...@gmail.com> wrote: > I've recently noticed some failures when using comet and xtandem! from TPP > to search some centroided DDA files generated by qtofpeakpicker. These > failures were all associated with files > 2GB. I was able to reduce the > file size by increasing the threshold which then lead to readmzXML, tandem, > and comet actually reading the files and searching them. I'm guessing that > there's a place in the TPP mzXML code that uses an int (which is 32-bit) > that's causing this problem. > > I've used TPP 4.8.0 on Windows 7 (installed via the exe provided on > sourceforge) and built the tpp from the svn on GNU/Linux (centos 7) and > encountered the same problem. > > I was wondering if anybody had any thoughts on where I should start > sifting through the code? > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to spctools-discuss+unsubscr...@googlegroups.com. > To post to this group, send email to spctools-discuss@googlegroups.com. > Visit this group at http://groups.google.com/group/spctools-discuss. > For more options, visit https://groups.google.com/d/optout. > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to spctools-discuss+unsubscr...@googlegroups.com. To post to this group, send email to spctools-discuss@googlegroups.com. Visit this group at http://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
