Hi,

I'm interested in learning more about how iProphet's NSP model works. The 
original paper doesn't discuss it as a first class iProphet model and Fig1 
only shows it in ProteinProphet. 

In this post 
<https://groups.google.com/forum/#!searchin/spctools-discuss/iprophet$20nsp/spctools-discuss/mLAMdJUP8AQ/wGQfI0061scJ>
 
David states "I have found that applying the NSP model at the iProphet step 
greatly improves performance on peptide level". But what is it doing, 
exactly? 

Thanks for providing such great software to the community!
John

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