HI Eric, I think it was the 7909, but I'm not 100% sure. I could try again using the 7909.
Alejandro On Saturday, May 18, 2019 at 1:00:39 AM UTC+2, Eric Deutsch wrote: > > Hi Alejandro, which checkout did you do? Was it this? > > > > svn checkout -r 7909 > http://svn.code.sf.net/p/sashimi/code/trunk/trans_proteomic_pipeline > > > > Or a little different? > > > > Thanks, > > Eric > > > > > > *From:* spctools...@googlegroups.com <javascript:> < > spctools...@googlegroups.com <javascript:>> *On Behalf Of *Alejandro > *Sent:* Friday, May 17, 2019 2:57 PM > *To:* spctools-discuss <spctools...@googlegroups.com <javascript:>> > *Subject:* [spctools-discuss] TPP 5.2 compile error Ubuntu 18.04 > > > > Hello all, > > > > Im trying to install TPP 5.2 on a computer running Ubuntu 18.04. I'm > following the guide but so far I have been unsuccessful. I just changed the > username and kept the tpp group. The install location is as is in the > guide, and the /dat would be different. After running > > make all > > As per the guide I tried to run again (make all) but always throws the > same error. > > > I get the following error:; > > > > *~/svn/trans_proteomic_pipeline$ make all* > > > > g++ -g -std=c++11 -Wno-deprecated -D_FILE_OFFSET_BITS=64 > -D_LARGEFILE_SOURCE -DTPPLIB > -I/home/laptop/svn/trans_proteomic_pipeline/src > -I/home/laptop/svn/trans_proteomic_pipeline/build/gnu-x86_64/include > -D__LINUX__ -fPIC -MMD -c -o > /home/laptop/svn/trans_proteomic_pipeline/build/gnu-x86_64/artifacts/Parsers/mzParser/saxmzmlhandler.o > > /home/laptop/svn/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzmlhandler.cpp > > > /home/laptop/svn/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzmlhandler.cpp:571:58: > > error: no ‘bool mzpSAXMzmlHandler::readHeaderFromOffset(f_off)’ member > function declared in class ‘mzpSAXMzmlHandler’ > > bool mzpSAXMzmlHandler::readHeaderFromOffset(f_off offset){ > > > ^ > > /home/laptop/svn/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzmlhandler.cpp:633:60: > > error: no ‘bool mzpSAXMzmlHandler::readSpectrumFromOffset(f_off)’ member > function declared in class ‘mzpSAXMzmlHandler’ > > bool mzpSAXMzmlHandler::readSpectrumFromOffset(f_off offset){ > > > ^ > > /home/laptop/svn/trans_proteomic_pipeline/src/Parsers/Makefile:87: recipe > for target > '/home/laptop/svn/trans_proteomic_pipeline/build/gnu-x86_64/artifacts/Parsers/mzParser/saxmzmlhandler.o' > > failed > > make: *** > [/home/laptop/svn/trans_proteomic_pipeline/build/gnu-x86_64/artifacts/Parsers/mzParser/saxmzmlhandler.o] > > Error 1 > > > > > > The "^" sign is bellow the closing parenthesis on (f_off offset) and on my > terminal is highlighted in red > > > > I really don't know how to troubleshoot this. > > > > Any help would be appreciated. > > > > Alejandro > > > > > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to spctools...@googlegroups.com <javascript:>. > To post to this group, send email to spctools...@googlegroups.com > <javascript:>. > Visit this group at https://groups.google.com/group/spctools-discuss. > To view this discussion on the web visit > https://groups.google.com/d/msgid/spctools-discuss/e9e10909-7716-4f46-accd-42e4fd33f010%40googlegroups.com > > <https://groups.google.com/d/msgid/spctools-discuss/e9e10909-7716-4f46-accd-42e4fd33f010%40googlegroups.com?utm_medium=email&utm_source=footer> > . > For more options, visit https://groups.google.com/d/optout. > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to spctools-discuss+unsubscr...@googlegroups.com. To post to this group, send email to spctools-discuss@googlegroups.com. Visit this group at https://groups.google.com/group/spctools-discuss. To view this discussion on the web visit https://groups.google.com/d/msgid/spctools-discuss/0eca6ccc-f165-4441-a02b-d53f5c3cc444%40googlegroups.com. For more options, visit https://groups.google.com/d/optout.
