hi again
yes, I reported the only entry after fresh restart of apache and accessing 
that url I get the following in the error log:

[Wed Jun 08 17:08:31.331141 2022] [mpm_prefork:notice] [pid 4451] AH00163: 
Apache/2.4.6 (CentOS) configured -- resuming normal operations
[Wed Jun 08 17:08:31.331189 2022] [core:notice] [pid 4451] AH00094: Command 
line: '/usr/sbin/httpd -D FOREGROUND'
[Wed Jun 08 17:08:39.167358 2022] [cgi:error] [pid 4453] [client 
127.0.0.1:44684] Options ExecCGI is off in this directory: 
/usr/local/tpp/cgi-bin/tpp_gui.pl

corresponding to this in the access log:

127.0.0.1 - - [08/Jun/2022:17:08:39 -0500] "GET /tpp/cgi-bin/tpp_gui.pl 
HTTP/1.1" 403 224 "-" "Mozilla/5.0 (X11; Linux x86_64; rv:91.0) 
Gecko/20100101 Firefox/91.0"

On Wednesday, June 8, 2022 at 5:04:27 PM UTC-5 David Shteynberg wrote:

> It sounds like you are making progress get this installed and running. Can 
> you check the apache error logs to see if they hold the next clue?
>
> Thanks,
> David
>
> On Wed, Jun 8, 2022, 4:25 PM Malcolm Cook <malcol...@gmail.com> wrote:
>
>> I just finished building and installing TPP under centos7 
>>
>> Following Testing the installation with a sample dataset 
>> <http://tools.proteomecenter.org/wiki/index.php?title=TPP_6.1.0:_Installing_on_Ubuntu_20.04_LTS#Testing_the_installation_with_a_sample_dataset_.28optional.29>
>>  on 
>> I navigate to http://localhost:10401/tpp/cgi-bin/tpp_gui.pl
>>
>> I am running apache as user 'apache'
>>
>> It returns 403/Forbidden
>>
>> I think I must have some permissions/ownership wrong somewhere
>>
>> The error log shows:
>>
>>  Options ExecCGI is off in this directory: /usr/local/tpp/cgi-bin/
>> tpp_gui.pl
>>
>> This should not be since the installed httpd-2.4-tpp-1.conf indeed has 
>> this stanza:
>>
>> Alias //tpp/cgi-bin "/usr/local/tpp/cgi-bin"
>> <Directory "/usr/local/tpp/cgi-bin">
>>     Options MultiViews ExecCGI
>>     AddHandler cgi-script .pl .cgi 
>> ...
>>
>> Any ideas?
>>
>> Here are some more configuration diagnostics that might help...
>>
>> the CGI program is executable by anyone and owned by user tpp:
>>
>> ls -la /usr/local/tpp/cgi-bin/tpp_gui.pl
>> -r-xr-xr-x 1 tpp tpp 484152 Jun  8 14:19 /usr/local/tpp/cgi-bin/
>> tpp_gui.pl
>>
>> Below I review the ownership of directories within /usr/local/tpp
>>
>>  tree -u -d /usr/local/tpp
>> /usr/local/tpp
>> |-- [tpp     ]  bin
>> |-- [tpp     ]  cgi-bin
>> |-- [tpp     ]  conf
>> |-- [tpp     ]  html
>> |   |-- [tpp     ]  css
>> |   |-- [tpp     ]  images
>> |   |   |-- [tpp     ]  help
>> |   |   `-- [tpp     ]  lorikeet
>> |   |-- [tpp     ]  js
>> |   `-- [tpp     ]  ref
>> |-- [tpp     ]  lib
>> |   |-- [tpp     ]  Mayu
>> |   |   `-- [tpp     ]  R
>> |   `-- [tpp     ]  perl
>> |       `-- [tpp     ]  TPP
>> |-- [tpp     ]  lic
>> |   |-- [tpp     ]  ProteoWizard
>> |   |-- [tpp     ]  boost
>> |   |-- [tpp     ]  bzip2
>> |   |-- [tpp     ]  d3
>> |   |-- [tpp     ]  expat
>> |   |-- [tpp     ]  fann
>> |   |-- [tpp     ]  gsl
>> |   |-- [tpp     ]  gzstream
>> |   |-- [tpp     ]  libarchive
>> |   `-- [tpp     ]  libgd
>> |-- [apache  ]  log
>> |-- [tpp     ]  man
>> |   |-- [tpp     ]  man1
>> |   `-- [tpp     ]  man3
>> |-- [tpp     ]  schema
>> `-- [apache  ]  users
>>     `-- [apache  ]  guest
>>
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>>
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