an oddity re: the error message is it says " ExecCGI is off in this 
directory: /usr/local/tpp/cgi-bin/tpp_gui.pl"  but it names a file, not a 
directory. 

...maybe nothing.

On Wednesday, June 8, 2022 at 5:14:17 PM UTC-5 Malcolm Cook wrote:

> hi again
> yes, I reported the only entry after fresh restart of apache and accessing 
> that url I get the following in the error log:
>
> [Wed Jun 08 17:08:31.331141 2022] [mpm_prefork:notice] [pid 4451] AH00163: 
> Apache/2.4.6 (CentOS) configured -- resuming normal operations
> [Wed Jun 08 17:08:31.331189 2022] [core:notice] [pid 4451] AH00094: 
> Command line: '/usr/sbin/httpd -D FOREGROUND'
> [Wed Jun 08 17:08:39.167358 2022] [cgi:error] [pid 4453] [client 
> 127.0.0.1:44684] Options ExecCGI is off in this directory: 
> /usr/local/tpp/cgi-bin/tpp_gui.pl
>
> corresponding to this in the access log:
>
> 127.0.0.1 - - [08/Jun/2022:17:08:39 -0500] "GET /tpp/cgi-bin/tpp_gui.pl 
> HTTP/1.1" 403 224 "-" "Mozilla/5.0 (X11; Linux x86_64; rv:91.0) 
> Gecko/20100101 Firefox/91.0"
>
> On Wednesday, June 8, 2022 at 5:04:27 PM UTC-5 David Shteynberg wrote:
>
>> It sounds like you are making progress get this installed and running. 
>> Can you check the apache error logs to see if they hold the next clue?
>>
>> Thanks,
>> David
>>
>> On Wed, Jun 8, 2022, 4:25 PM Malcolm Cook <malcol...@gmail.com> wrote:
>>
>>> I just finished building and installing TPP under centos7 
>>>
>>> Following Testing the installation with a sample dataset 
>>> <http://tools.proteomecenter.org/wiki/index.php?title=TPP_6.1.0:_Installing_on_Ubuntu_20.04_LTS#Testing_the_installation_with_a_sample_dataset_.28optional.29>
>>>  on 
>>> I navigate to http://localhost:10401/tpp/cgi-bin/tpp_gui.pl
>>>
>>> I am running apache as user 'apache'
>>>
>>> It returns 403/Forbidden
>>>
>>> I think I must have some permissions/ownership wrong somewhere
>>>
>>> The error log shows:
>>>
>>>  Options ExecCGI is off in this directory: /usr/local/tpp/cgi-bin/
>>> tpp_gui.pl
>>>
>>> This should not be since the installed httpd-2.4-tpp-1.conf indeed has 
>>> this stanza:
>>>
>>> Alias //tpp/cgi-bin "/usr/local/tpp/cgi-bin"
>>> <Directory "/usr/local/tpp/cgi-bin">
>>>     Options MultiViews ExecCGI
>>>     AddHandler cgi-script .pl .cgi 
>>> ...
>>>
>>> Any ideas?
>>>
>>> Here are some more configuration diagnostics that might help...
>>>
>>> the CGI program is executable by anyone and owned by user tpp:
>>>
>>> ls -la /usr/local/tpp/cgi-bin/tpp_gui.pl
>>> -r-xr-xr-x 1 tpp tpp 484152 Jun  8 14:19 /usr/local/tpp/cgi-bin/
>>> tpp_gui.pl
>>>
>>> Below I review the ownership of directories within /usr/local/tpp
>>>
>>>  tree -u -d /usr/local/tpp
>>> /usr/local/tpp
>>> |-- [tpp     ]  bin
>>> |-- [tpp     ]  cgi-bin
>>> |-- [tpp     ]  conf
>>> |-- [tpp     ]  html
>>> |   |-- [tpp     ]  css
>>> |   |-- [tpp     ]  images
>>> |   |   |-- [tpp     ]  help
>>> |   |   `-- [tpp     ]  lorikeet
>>> |   |-- [tpp     ]  js
>>> |   `-- [tpp     ]  ref
>>> |-- [tpp     ]  lib
>>> |   |-- [tpp     ]  Mayu
>>> |   |   `-- [tpp     ]  R
>>> |   `-- [tpp     ]  perl
>>> |       `-- [tpp     ]  TPP
>>> |-- [tpp     ]  lic
>>> |   |-- [tpp     ]  ProteoWizard
>>> |   |-- [tpp     ]  boost
>>> |   |-- [tpp     ]  bzip2
>>> |   |-- [tpp     ]  d3
>>> |   |-- [tpp     ]  expat
>>> |   |-- [tpp     ]  fann
>>> |   |-- [tpp     ]  gsl
>>> |   |-- [tpp     ]  gzstream
>>> |   |-- [tpp     ]  libarchive
>>> |   `-- [tpp     ]  libgd
>>> |-- [apache  ]  log
>>> |-- [tpp     ]  man
>>> |   |-- [tpp     ]  man1
>>> |   `-- [tpp     ]  man3
>>> |-- [tpp     ]  schema
>>> `-- [apache  ]  users
>>>     `-- [apache  ]  guest
>>>
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>>

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