Sure! This was my command: [image: image.png]
On Tue, Aug 1, 2023 at 10:48 AM sophie culos <sophiecu...@gmail.com> wrote: > David, would you be at all willing to post the code that you were using? > I'll give "/" a shot in my path definitions. > > > > On Tuesday, August 1, 2023 at 10:35:06 AM UTC-7 David Shteynberg wrote: > >> For what it is worth, yesterday I downloaded the PeptideSieve and ran it >> on my system commandline to generate non-empty output files successfully. >> I used '/' in my path definitions, but I am not sure it that makes a >> difference. Good luck! >> >> On Tue, Aug 1, 2023 at 1:21 AM 'Luis Mendoza' via spctools-discuss < >> spctools...@googlegroups.com> wrote: >> >>> Hello Sophie, >>> I don't have much help to offer at this point, since we have not used >>> that software in a very long time. But one thing I notice from your >>> screenshots is that the folder/directory name appears to have a space in >>> "MS User", which is not present in the commands, e.g. >>> "C:\Users\msuser\TPP\...". Perhaps this is causing the errors you observe? >>> Cheers, >>> --Luis >>> >>> On Mon, Jul 31, 2023 at 4:54 PM sophie culos <sophi...@gmail.com> wrote: >>> >>>> Hello, >>>> >>>> I am trying to use peptideSieve for an in silico digestion to identify >>>> proteotypic peptides for MALDI. >>>> >>>> I've attached a screenshot of what I've been inputting into the command >>>> line and the error I've been consistently getting. The output file is >>>> always blank, and I'm not sure how to proceed. >>>> >>>> Any help would be very much appreciated! >>>> >>>> Cheers, >>>> Sophie >>>> [image: peptideSieve error.PNG] >>>> >>>> >>>> >>>> -- >>>> You received this message because you are subscribed to the Google >>>> Groups "spctools-discuss" group. >>>> To unsubscribe from this group and stop receiving emails from it, send >>>> an email to spctools-discu...@googlegroups.com. >>>> To view this discussion on the web visit >>>> https://groups.google.com/d/msgid/spctools-discuss/3017c88a-3ac5-4c9d-a8f1-34e9da686575n%40googlegroups.com >>>> <https://groups.google.com/d/msgid/spctools-discuss/3017c88a-3ac5-4c9d-a8f1-34e9da686575n%40googlegroups.com?utm_medium=email&utm_source=footer> >>>> . >>>> >>> -- >>> You received this message because you are subscribed to the Google >>> Groups "spctools-discuss" group. >>> To unsubscribe from this group and stop receiving emails from it, send >>> an email to spctools-discu...@googlegroups.com. >>> >> To view this discussion on the web visit >>> https://groups.google.com/d/msgid/spctools-discuss/CACyS9brV76SC0pD2K8wNwvB8xkf1dGwM2%2BCc-kgDWeOxTb89uw%40mail.gmail.com >>> <https://groups.google.com/d/msgid/spctools-discuss/CACyS9brV76SC0pD2K8wNwvB8xkf1dGwM2%2BCc-kgDWeOxTb89uw%40mail.gmail.com?utm_medium=email&utm_source=footer> >>> . >>> >> -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to spctools-discuss+unsubscr...@googlegroups.com. > To view this discussion on the web visit > https://groups.google.com/d/msgid/spctools-discuss/9523f77b-7758-42fd-98fc-5211c0b255c8n%40googlegroups.com > <https://groups.google.com/d/msgid/spctools-discuss/9523f77b-7758-42fd-98fc-5211c0b255c8n%40googlegroups.com?utm_medium=email&utm_source=footer> > . > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to spctools-discuss+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/spctools-discuss/CAGJJY%3D9gmv3%2BQ%3D13p3NSYMQ%3DKA%3D_O%2Bm0rHaGuk%3D6tZdoRLmucw%40mail.gmail.com.
