On Wed, 2 Apr 2014 09:09:58 -0700
Kevin Xu <accol...@gmail.com> wrote:

> 
> On Apr 2, 2014, at 9:01 AM, Simon Slavin <slav...@bigfraud.org> wrote:
> 
> > 
> > On 2 Apr 2014, at 4:55pm, Kevin Xu <accol...@gmail.com> wrote:
> > 
> >> PRAGMA journal_mode=MEMORY;
> > 
> > Since you're not using WAL mode, try it using WAL mode.  If you
> > were already using WAL mode, I'd suggest trying with it off !
> > 
> > Given your answers to the questions so far, I can't think of
> > anything else to try you haven't already thought of.  The result
> > you report don't seem unusual in any way.  I'm not looking at them
> > and thinking you've done anything wrong.
> > 
> > Simon.
> > _______________________________________________
> > sqlite-users mailing list
> > sqlite-users@sqlite.org
> > http://sqlite.org:8080/cgi-bin/mailman/listinfo/sqlite-users
> 
> Yes, I have tried various combinations of WAL/OFF/MEMORY and they do
> not appear to affect the insert speed in any meaningful manner (e.g.
> +/- 0.3s on 500K inputs).
> 
> However, http://blog.quibb.org/2010/08/fast-bulk-inserts-into-sqlite/
> appear to to achieve an average of over 150K inserts per second over
> 4 million rows. I am aware that benchmark results are highly
> dependent on input size, platform, and hardware, I would imagine the
> SSD I am running on would not be such a tight bottleneck. Thus, I am
> trying to see if there is anything I can do to improve on this.

Perhaps he has 2 disks, first for read FASTQ, second for write sqlite db.

> 
> Kevin

---   ---
Eduardo Morras <emorr...@yahoo.es>
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