On Thursday 07 May 2009 01:06:24 Dennis Nezic wrote:
> On Thu, 7 May 2009 00:23:37 +0100, Matthew Toseland wrote:
> > On Wednesday 06 May 2009 23:52:22 Juiceman wrote:
> > > 
> > > On Wed, May 6, 2009 at 12:50 PM, Juiceman  wrote:
> > > > On Wed, May 6, 2009 at 11:37 AM, Matthew Toseland
> > > >  wrote:
> > > >> On Wednesday 06 May 2009 14:43:59 Victor Denisov wrote:
> > > >>> Matthew Toseland wrote:
> > > >>> > This is the downside of db4o. If it is a widespread problem,
> > > >>> > we're 
> > gonna
> > > >> have
> > > >>> > to revert it. Which means throwing away more than 6 months
> > > >>> > work 
> > largely
> > > >>> > funded by Google's $18K.
> > > >>>
> > > >>> I think that using a database is a good idea (although I
> > > >>> personally would've opted for a relational database such as
> > > >>> Derby). So I'd prefer to try and understand and fix the issue
> > > >>> rather than hiding from it :-).
> > > >>>
> > > >>> > My database queue is usually pretty empty, even with queued
> > > >>> > downloads, 
> > but
> > > >> I
> > > >>> > have 8G and fast mirrored disks...
> > > >>>
> > > >>> The problem's that Freenet *doesn't* even use the amount of
> > > >>> memory I provide it with (I'm yet to see it use more than 120
> > > >>> megs out of 320 I allow for the heap). I'd be willing to
> > > >>> dedicate as much memory as required if only it'd help.
> > > >>>
> > > >>> My hard drives are nothing special - 250Gb 7200 RPM Seagate
> > > >>> ones, 16 Mb cache, SATA2, no NCQ - though definitely not the
> > > >>> slowest out there. I see ~35 Mb/s read speed and ~28 Mb/s write
> > > >>> speed for medium-sized files and ~5 Mb/s to 8 Mb/s for small
> > > >>> files in the tests I'd done. I'll probably have to test the
> > > >>> same from inside Java to make absolutely sure that it's not
> > > >>> some weird JVM issue on my platform, though.
> > > >>>
> > > >>> > 2650 handles is strange, on unix we are generally limited to
> > > >>> > 1024 and generally we don't exceed that. Both of your
> > > >>> > problems may be caused by
> > > >> flaky
> > > >>> > hardware, but frankly we do need to run on flaky real world 
> > hardware. :|
> > > >>>
> > > >>> I don't have Freenet running right now, will check it later.
> > > >>> But I2P is using 2670 handles right now, and Azureus uses 1450
> > > >>> - so 2600 for Freenet is definitely nothing out of the ordinary
> > > >>> on Windows. Oh, and the highest handle user on my machine is
> > > >>> MySQL, which uses ~69000 handles and works absolutely fine :-).
> > > >>>
> > > >>> >> Same here. Enormous disk queues. I've also compared i/o
> > > >>> >> counts with 
> > i/o
> > > >>> >> bytes read/written - that's how I know that i/o operations
> > > >>> >> are small. 
> > In
> > > >>> >> the statistics screen, I routinely see 100+ outstanding
> > > >>> >> database 
> > jobs.
> > > >>> >> It can't be good.
> > > >>> >
> > > >>> > This just confirms that disk I/O is the problem ... and
> > > >>> > almost 
> > certainly
> > > >>> > caused by db4o as it goes away if nothing is queued.
> > > >>>
> > > >>> My thinking exactly. Would providing you with a snapshot of
> > > >>> CPU/memory performance under YourKit Profiler (I have academic
> > > >>> licenses for both 7.5 and 8.0, IIRC) or VisualVM (which is now
> > > >>> a part of the JDK distributive) on my machine help? Any logging
> > > >>> I can turn on to help? BTW, I have logging set to ERROR for
> > > >>> now, as with NORMAL level it logs ~2Mb per minute, adding
> > > >>> noticeably to overall disk contention.
> > > >>>
> > > >>> Regards,
> > > >>> Victor Denisov.
> > > >>
> > > >> One other thing, for both you and Juiceman:
> > > >> How's the CPU usage? Given how much RAM you have I would expect
> > > >> node.db4o 
> > to
> > > >> be cached in memory (how big is it?). But doing a read through
> > > >> the OS to 
> > the
> > > >> OS disk cache may cost a lot of CPU (context switch etc) ... Is
> > > >> there a 
> > lot
> > > >> of CPU usage for the freenet process? To the point that it might
> > > >> be the 
> > cause
> > > >> of the poor overall system performance? And how much CPU usage
> > > >> is system?
> > > >>
> > > >
> > > > Freenet CPU usage fluctuates between 2 and 27% of a quad core
> > > > system. The rest of the machine rarely uses more than 15% unless
> > > > I am gaming, then it still only hits 50%.  CPU usage is quite
> > > > acceptable for now. I have 3GB of RAM, 512 allocated to Freenet.
> > > 
> > > Node.db4o was 375 MB.  No uploads, 1 GB of queued downloads.
> > > 
> > > How often is this file written to?  Anyway to queue writes in a RAM
> > > buffer and write to disk periodically?
> > 
> > I don't think so, at least not easily i.e. not without a custom
> > IoAdapter able to buffer many commits separately. What I don't
> > understand is what all these writes are *for*. If it's just
> > downloads, most of the time it should just be selecting a
> > SplitFileFetcherSubSegment, fetching all the blocks in it (without
> > accessing the database), updating them all at once when they've
> > failed, and then selecting a new segment - roughly every 2 minutes.
> > 
> > However, I guess if most of the fetches succeed, that produces a lot
> > more traffic. We have to write the block to disk when we fetch it,
> > look up who owns it (because many fetchers can have a claim on one
> > block), probably copy it, tell the SFFS and SFFSS about it, write the
> > update to the SFFS, and then when we've got all the blocks for a
> > segment do a load more work.
> 
> My 34MiB node.db40 is written to every couple of seconds. Every-second
> writes are common. Sometimes the filesize increases -- often times it
> stays the same -- although every time it changes (according to md5sum).
> Maybe for larger .db40's this is more problematic :S. What are all
> these writes for!? :).

That's what I want to know! Do the logging changes I mentioned, find out.
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