Hi
I am using T2 nihtly build from 22.04.2009.
I am opening a lot of T1 workflows, executing some of them and closing
them, so that i have only one opened at a time.
After ~50 workflows the memory usage goes to above 330Mb, The CPU usage
goes to >90% and I get following error (see below). It must be some kind
of memory leak because when I close the workbench and open it once more,
everything goes all right.
Jerzy Orlowski
-------------------------------------------------
Exception in thread "Opening dataflow(s)
[/home/jerzyo/projects/workflows/workflows_xml/t1/myexperiment/http____www.myexperiment.org__workflows__218__download__ebi_mpsrch_820.xml__48427.xml]"
java.lang.OutOfMemoryError: Java heap space
at java.util.Arrays.copyOf(Arrays.java:2882)
at
java.lang.AbstractStringBuilder.expandCapacity(AbstractStringBuilder.java:100)
at
java.lang.AbstractStringBuilder.append(AbstractStringBuilder.java:390)
at java.lang.StringBuffer.append(StringBuffer.java:224)
at java.io.StringWriter.write(StringWriter.java:84)
at
net.sf.taverna.t2.workbench.models.graph.DotWriter.writeLine(DotWriter.java:267)
at
net.sf.taverna.t2.workbench.models.graph.DotWriter.writeSubGraph(DotWriter.java:117)
at
net.sf.taverna.t2.workbench.models.graph.DotWriter.writeGraph(DotWriter.java:106)
at
net.sf.taverna.t2.workbench.models.graph.svg.SVGGraphController.generateSVGDocument(SVGGraphController.java:121)
at
net.sf.taverna.t2.workbench.views.graph.GraphViewComponent$12.redraw(GraphViewComponent.java:349)
at
net.sf.taverna.t2.workbench.views.graph.GraphViewComponent.setDataflow(GraphViewComponent.java:371)
at
net.sf.taverna.t2.workbench.views.graph.GraphViewComponent$2.notify(GraphViewComponent.java:158)
at
net.sf.taverna.t2.workbench.views.graph.GraphViewComponent$2.notify(GraphViewComponent.java:154)
at
net.sf.taverna.t2.lang.observer.MultiCaster.notify(MultiCaster.java:64)
at
net.sf.taverna.t2.lang.ui.ModelMap.modelChanged(ModelMap.java:126)
at net.sf.taverna.t2.lang.ui.ModelMap.setModel(ModelMap.java:119)
at
net.sf.taverna.t2.workbench.file.impl.FileManagerImpl.setCurrentDataflow(FileManagerImpl.java:447)
at
net.sf.taverna.t2.workbench.file.impl.FileManagerImpl.setCurrentDataflow(FileManagerImpl.java:430)
at
net.sf.taverna.t2.workbench.file.impl.FileManagerImpl.openDataflowInternal(FileManagerImpl.java:502)
at
net.sf.taverna.t2.workbench.file.impl.FileManagerImpl.openDataflow(FileManagerImpl.java:333)
at
net.sf.taverna.t2.workbench.file.impl.actions.OpenWorkflowAction.openWorkflows(OpenWorkflowAction.java:154)
at
net.sf.taverna.t2.workbench.file.impl.actions.OpenWorkflowAction$FileOpenerThread.run(OpenWorkflowAction.java:348)
Exception in thread "Timer-1" java.lang.OutOfMemoryError: Java heap space
------------------------------------------------------------------------------
Stay on top of everything new and different, both inside and
around Java (TM) technology - register by April 22, and save
$200 on the JavaOne (SM) conference, June 2-5, 2009, San Francisco.
300 plus technical and hands-on sessions. Register today.
Use priority code J9JMT32. http://p.sf.net/sfu/p
_______________________________________________
taverna-users mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/taverna-users
Documentation: http://www.mygrid.org.uk/usermanual1.7/
FAQ: http://www.mygrid.org.uk/wiki/Mygrid/TavernaFaq
Biological Services: http://www.mygrid.org.uk/wiki/Mygrid/BiologicalWebServices