Hi I encounered strange error when reading a workflow in T2 (t2 nightly build from 22.04)
The workflow is available on ftp://ftp.genesilico.pl/jerzyo/187.t2flow The workflow seems to be loaded, but its diagram is not displayed Jerzyo --------------------------------------------------------------- INFO 2009-04-22 20:05:15,423 (net.sf.taverna.t2.workbench.file.impl.FileManagerImpl:330) - Loaded workflow: EscherichiacoliFromcDNAMicroarrayRawDatatoPathwaysandPublishedAbstracts 1cc5189d-8e56-4b43-9426-c4b9184cc936 from /home/jerzyo/projects/workflows/workflows_xml/t2/my_experiment_translated/187.t2flow using net.sf.taverna.t2.workbench.file.impl.t2dataflowope...@5388b5 Exception in thread "Opening dataflow(s) [/home/jerzyo/projects/workflows/workflows_xml/t2/my_experiment_translated/187.t2flow]" net.sf.taverna.t2.workbench.models.graph.dot.TokenMgrError: Lexical error at line 1, column 1723. Encountered: "#" (35), after : "" at net.sf.taverna.t2.workbench.models.graph.dot.DOTParserTokenManager.getNextToken(DOTParserTokenManager.java:1229) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_scan_token(DOTParser.java:1029) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_27(DOTParser.java:772) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_24(DOTParser.java:682) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_12(DOTParser.java:781) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_7(DOTParser.java:744) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_1(DOTParser.java:751) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_25(DOTParser.java:841) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_19(DOTParser.java:848) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_6(DOTParser.java:875) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_30(DOTParser.java:806) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_6(DOTParser.java:880) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_30(DOTParser.java:806) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_6(DOTParser.java:880) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_30(DOTParser.java:806) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_6(DOTParser.java:880) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_30(DOTParser.java:806) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_6(DOTParser.java:880) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_30(DOTParser.java:806) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_6(DOTParser.java:880) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_30(DOTParser.java:806) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_6(DOTParser.java:880) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3_6(DOTParser.java:728) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_2(DOTParser.java:736) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_8(DOTParser.java:687) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_1(DOTParser.java:753) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_25(DOTParser.java:841) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_19(DOTParser.java:848) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_6(DOTParser.java:875) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_30(DOTParser.java:806) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_6(DOTParser.java:880) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3_6(DOTParser.java:728) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_2(DOTParser.java:736) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_8(DOTParser.java:687) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_1(DOTParser.java:753) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_25(DOTParser.java:841) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_19(DOTParser.java:848) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_6(DOTParser.java:875) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_30(DOTParser.java:806) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_6(DOTParser.java:880) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3_6(DOTParser.java:728) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_2(DOTParser.java:736) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_8(DOTParser.java:687) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3R_1(DOTParser.java:753) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_3_1(DOTParser.java:831) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.jj_2_1(DOTParser.java:604) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.stmt(DOTParser.java:159) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.stmt_list(DOTParser.java:110) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.stmt_list(DOTParser.java:126) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.stmt_list(DOTParser.java:126) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.stmt_list(DOTParser.java:126) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.stmt_list(DOTParser.java:126) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.graph(DOTParser.java:80) at net.sf.taverna.t2.workbench.models.graph.dot.DOTParser.parse(DOTParser.java:25) at net.sf.taverna.t2.workbench.models.graph.dot.GraphLayout.layoutGraph(GraphLayout.java:65) at net.sf.taverna.t2.workbench.models.graph.svg.SVGGraphController.generateSVGDocument(SVGGraphController.java:130) at net.sf.taverna.t2.workbench.views.graph.GraphViewComponent$12.redraw(GraphViewComponent.java:349) at net.sf.taverna.t2.workbench.views.graph.GraphViewComponent.setDataflow(GraphViewComponent.java:371) at net.sf.taverna.t2.workbench.views.graph.GraphViewComponent$2.notify(GraphViewComponent.java:158) at net.sf.taverna.t2.workbench.views.graph.GraphViewComponent$2.notify(GraphViewComponent.java:154) at net.sf.taverna.t2.lang.observer.MultiCaster.notify(MultiCaster.java:64) at net.sf.taverna.t2.lang.ui.ModelMap.modelChanged(ModelMap.java:126) at net.sf.taverna.t2.lang.ui.ModelMap.setModel(ModelMap.java:119) at net.sf.taverna.t2.workbench.file.impl.FileManagerImpl.setCurrentDataflow(FileManagerImpl.java:447) at net.sf.taverna.t2.workbench.file.impl.FileManagerImpl.setCurrentDataflow(FileManagerImpl.java:430) at net.sf.taverna.t2.workbench.file.impl.FileManagerImpl.openDataflowInternal(FileManagerImpl.java:502) at net.sf.taverna.t2.workbench.file.impl.FileManagerImpl.openDataflow(FileManagerImpl.java:333) at net.sf.taverna.t2.workbench.file.impl.actions.OpenWorkflowAction.openWorkflows(OpenWorkflowAction.java:154) at net.sf.taverna.t2.workbench.file.impl.actions.OpenWorkflowAction$FileOpenerThread.run(OpenWorkflowAction.java:348) --------------------------------------------------- ------------------------------------------------------------------------------ Stay on top of everything new and different, both inside and around Java (TM) technology - register by April 22, and save $200 on the JavaOne (SM) conference, June 2-5, 2009, San Francisco. 300 plus technical and hands-on sessions. 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