On 13 Jul 2010, at 12:34, David Withers wrote: > > On 13 Jul 2010, at 11:49, [email protected] wrote: > >> Hi, >> >> I downloaded Taverna 2.2.0, extracted it and started a new workflow. >> I added the following Biomart service to the workflow: >> >> >> ENSEMBL FUNGAL 5 (EBI UK) >> anidulans_eg_gene - Aspergillus nidulans genes (Eurofung) >> >> >> Then a window pops up (Title: Workflow9:anidulans_eg_gene) where I can read >> the following: >> >> >> Error while generating the Query Editor >> >> java.lang.NullPointerException >> >> >> >> When clicking the "Filters" or "Attributes" button nothing happens, it's >> just "fetching ..." forever. >> >> What am I doing wrong? Is this a known bug? Is there something wrong with my >> configuration and can I solve this problem myself? > > > Hi Edrin, > > It looks like http://www.biomart.org/ is down at the moment. I'll see if the > problem persists when biomart is back up.
So http://www.biomart.org/ is back up but there is still a problem when using this dataset in Taverna. The problem is caused by a filter that references a filter in another dataset, but the referenced dataset (40005_marker_start) doesn't exist. Taverna should ignore filters where the referenced dataset is not available so I've logged this as a bug at http://www.mygrid.org.uk/dev/issues/browse/T2-1513 David. -- David Withers School of Computer Science, University of Manchester, Oxford Road, Manchester, M13 9PL, UK. +44 (0)161 275 0683 ------------------------------------------------------------------------------ This SF.net email is sponsored by Sprint What will you do first with EVO, the first 4G phone? Visit sprint.com/first -- http://p.sf.net/sfu/sprint-com-first _______________________________________________ taverna-users mailing list [email protected] [email protected] Web site: http://www.taverna.org.uk Mailing lists: http://www.taverna.org.uk/about/contact-us/
