First of all you have to make sure there is a session object. You can create one with cocoon.session or with session actions I believe.

To pass dynamic parameters to flowscript, add the map:parameter to the map:call 
statements:

  <map:call function="myfunc">
    <map:parameter name="myvar" value="{session-attr:myattr}" />
  </map:call>

And not to the map:script command!

In flowscript you will need the following:

  function myfunc {
        var myvar = cocoon.parameters["myvar"];
        // or
        var myvar = cocoon.parameter.myvar;
        ...
  }

Cheers,
Geert

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