Hi Ian, Oh well. You can find the contents of build3.log on http://pastebin.com/0q9NNAT4 and I note nothing different, or so it seems. Here is a query about mpich and openmpi on my system:
ComerMacProRetina:Cactus comerduncan$ port installed | grep mpich mpich-default @3.1.3_0+gcc49 mpich-default @3.1.4_0+gcc49 petsc @3.5.3_1+accelerate+hwloc+mpich ComerMacProRetina:Cactus comerduncan$ port installed | grep openmpi openmpi @1.7.5_3 (active) openmpi-default @1.7.5_3+gcc47 (active) petsc @3.5.3_1+accelerate+hwloc+openmpi (active) Also, I note in the osx-macport config file that the compiler specified is gcc49 to wit: CPP = cpp-mp-4.9 FPP = cpp-mp-4.9 CC = gcc-mp-4.9 CXX = g++-mp-4.9 F90 = gfortran-mp-4.9 However, note that the active openmpi-default points to gcc47. Could this be a problem? Thanks for your help. Comer On Wed, May 20, 2015 at 12:55 PM, Ian Hinder <[email protected]> wrote: > > On 20 May 2015, at 18:35, Comer Duncan <[email protected]> wrote: > > Ok, I deactivated mpich and have run simfactory/bin/sim build > --optionlist=osx-macports.cfg >build2.log 2>&1 and get similar errors. I > have pasted the contents of build2.log to http://pastebin.com/kcua0vKQ. > It does not seem that the deactivation of mpich had the desired effect. > > > You probably need to do a clean build by removing configs/sim and building > again (this is usually good advice in general, if you suspect there is > something weird happening with the build system). Having both MPI > versions' header files around during compilation might have caused the > problems. > > -- > Ian Hinder > http://members.aei.mpg.de/ianhin > >
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