Version OGS/GE 2011.11p1 (Rocks 6.1)
Hi,
I've got a situation where a user's qsub jobs are being run in
interactive-only queues, as well a the expected batch-only queue. Here's
his command, and below that are some specs of my setup. Anyone have any
idea how this might happen or what I'm missing? I saw this happen yesterday
for a job by another user, but otherwse qsub jobs seems to be properly
going to only all.q. Thanks.
-M
qsub -v ITK_GLOBAL_DEFAULT_NUMBER_OF_THREADS=${slots},ANTSPATH=${ANTSPATH}
-pe unihost $slots -S /bin/bash -cwd -o ${outputTP_Dir}/${subj}_${tp}.stdout
-e ${outputTP_Dir}/${subj}_${tp}.stderr ${ANTSPATH}antsCorticalThickness.sh
-d 3 -a $t1 -e ${templateDir}/template.nii.gz -m ${templateDir}/masks/
templateBrainMaskProbability.nii.gz -f ${templateDir}/masks/
templateBrainExtractionRegistrationMask.nii.gz -p
${templateDir}/priors/prior%02d.nii.gz -t ${templateDir}/templateBrain.nii.gz
-o ${outputTP_Dir}/${subj}_${tp}_
[root@chead ~]# qstat -u pcook
35282 0.60500 antsCortic pcook r 05/20/2014 09:56:42
[email protected] 2
35283 0.60500 antsCortic pcook r 05/20/2014 09:57:27
[email protected] 2
35284 0.60500 antsCortic pcook r 05/20/2014 10:19:36
[email protected] 2
35285 0.60500 antsCortic pcook r 05/20/2014 10:19:50
[email protected] 2
35286 0.60500 antsCortic pcook r 05/20/2014 10:43:01
[email protected] 2
35287 0.60500 antsCortic pcook r 05/20/2014 10:51:37
[email protected] 2
35960 0.60500 antsCortic pcook r 05/20/2014 11:28:11
[email protected] 2
35961 0.60500 antsCortic pcook r 05/20/2014 11:28:12
[email protected] 2
35962 0.60500 antsCortic pcook r 05/20/2014 11:28:12
[email protected] 2
35963 0.60500 antsCortic pcook r 05/20/2014 12:31:56
[email protected] 2
35964 0.60500 antsCortic pcook r 05/20/2014 12:34:17
[email protected] 2
35965 0.60500 antsCortic pcook r 05/20/2014 12:53:47
[email protected] 2
35966 0.60500 antsCortic pcook r 05/20/2014 12:54:45
[email protected] 2
35967 0.60500 antsCortic pcook r 05/20/2014 13:04:26
[email protected] 2
35968 0.60500 antsCortic pcook r 05/20/2014 13:05:13
[email protected] 2
35969 0.60500 antsCortic pcook r 05/20/2014 13:10:23
[email protected] 2
35970 0.60500 antsCortic pcook r 05/20/2014 13:19:27
[email protected] 2
35971 0.60500 antsCortic pcook r 05/20/2014 13:20:57
[email protected] 2
35972 0.60500 antsCortic pcook r 05/20/2014 13:28:03
[email protected] 2
35973 0.60500 antsCortic pcook r 05/20/2014 13:32:47
[email protected] 2
35974 0.60500 antsCortic pcook r 05/20/2014 13:35:31
[email protected] 2
35975 0.60500 antsCortic pcook r 05/20/2014 14:21:19
[email protected] 2
[root@chead ~]# qconf -sql
all.q
qlogin.long.q
qlogin.q
[root@chead ~]# qconf -sq all.q | grep -e type -e pe_list
qtype BATCH
pe_list make mpich mpi orte unihost serial
[root@chead ~]# qconf -sq qlogin.q | grep -e type -e pe_list
qtype INTERACTIVE
pe_list make unihost serial
[root@chead ~]# qconf -sq qlogin.long.q | grep -e type -e pe_list
qtype INTERACTIVE
pe_list make unihost serial
[root@chead ~]# qconf -srqs
{
name limit_user_interactive_slots
description Limit the users' interactive slots based
enabled TRUE
limit users {*} queues {qlogin.q,qlogin.long.q} to slots=6
}
{
name limit_user_slots
description Limit the users' batch slots
enabled TRUE
limit users {*} queues {all.q} to slots=32
}
[root@chead ~]# qconf -sp unihost
pe_name unihost
slots 9999
user_lists NONE
xuser_lists NONE
start_proc_args /bin/true
stop_proc_args /bin/true
allocation_rule $pe_slots
control_slaves FALSE
job_is_first_task TRUE
urgency_slots min
accounting_summary FALSE
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