Am 20.05.2014 um 22:25 schrieb Michael Stauffer:
> On Tue, May 20, 2014 at 4:20 PM, Reuti <[email protected]> wrote:
> Hi,
>
> Am 20.05.2014 um 21:42 schrieb Michael Stauffer:
>
>> Version OGS/GE 2011.11p1 (Rocks 6.1)
>>
>
>> I've got a situation where a user's qsub jobs are being run in
>> interactive-only queues,
>
> an attached PE makes a queue also a BATCH queue for jobs requesting this PE.
> There is no parallel-interactive-only setting.
>
> Maybe a JSV could route a parallel batch job to dedicated queues only.
>
> -- Reuti
>
> Thanks. So if I have a separate PE that's used for qlogin's only and assigned
> that one only to the qlogin queues and the original PE only to the batch
> queue, it should be ok?
Yes, but could be abused by users - or even interchanged by accident.
-- Reuti
> Seems easier than using JSV's (haven't tried one yet).
>
> -M
>
>
>
>> as well a the expected batch-only queue. Here's his command, and below that
>> are some specs of my setup. Anyone have any idea how this might happen or
>> what I'm missing? I saw this happen yesterday for a job by another user, but
>> otherwse qsub jobs seems to be properly going to only all.q. Thanks.
>>
>> -M
>>
>> qsub -v ITK_GLOBAL_DEFAULT_NUMBER_OF_THREADS=${slots},ANTSPATH=${ANTSPATH}
>> -pe unihost $slots -S /bin/bash -cwd -o ${outputTP_Dir}/${subj}_${tp}.stdout
>> -e ${outputTP_Dir}/${subj}_${tp}.stderr ${ANTSPATH}antsCorticalThickness.sh
>> -d 3 -a $t1 -e ${templateDir}/template.nii.gz -m
>> ${templateDir}/masks/templateBrainMaskProbability.nii.gz -f
>> ${templateDir}/masks/templateBrainExtractionRegistrationMask.nii.gz -p
>> ${templateDir}/priors/prior%02d.nii.gz -t
>> ${templateDir}/templateBrain.nii.gz -o ${outputTP_Dir}/${subj}_${tp}_
>>
>> [root@chead ~]# qstat -u pcook
>> 35282 0.60500 antsCortic pcook r 05/20/2014 09:56:42
>> [email protected] 2
>> 35283 0.60500 antsCortic pcook r 05/20/2014 09:57:27
>> [email protected] 2
>> 35284 0.60500 antsCortic pcook r 05/20/2014 10:19:36
>> [email protected] 2
>> 35285 0.60500 antsCortic pcook r 05/20/2014 10:19:50
>> [email protected] 2
>> 35286 0.60500 antsCortic pcook r 05/20/2014 10:43:01
>> [email protected] 2
>> 35287 0.60500 antsCortic pcook r 05/20/2014 10:51:37
>> [email protected] 2
>> 35960 0.60500 antsCortic pcook r 05/20/2014 11:28:11
>> [email protected] 2
>> 35961 0.60500 antsCortic pcook r 05/20/2014 11:28:12
>> [email protected] 2
>> 35962 0.60500 antsCortic pcook r 05/20/2014 11:28:12
>> [email protected] 2
>> 35963 0.60500 antsCortic pcook r 05/20/2014 12:31:56
>> [email protected] 2
>> 35964 0.60500 antsCortic pcook r 05/20/2014 12:34:17
>> [email protected] 2
>> 35965 0.60500 antsCortic pcook r 05/20/2014 12:53:47
>> [email protected] 2
>> 35966 0.60500 antsCortic pcook r 05/20/2014 12:54:45
>> [email protected] 2
>> 35967 0.60500 antsCortic pcook r 05/20/2014 13:04:26
>> [email protected] 2
>> 35968 0.60500 antsCortic pcook r 05/20/2014 13:05:13
>> [email protected] 2
>> 35969 0.60500 antsCortic pcook r 05/20/2014 13:10:23
>> [email protected] 2
>> 35970 0.60500 antsCortic pcook r 05/20/2014 13:19:27
>> [email protected] 2
>> 35971 0.60500 antsCortic pcook r 05/20/2014 13:20:57
>> [email protected] 2
>> 35972 0.60500 antsCortic pcook r 05/20/2014 13:28:03
>> [email protected] 2
>> 35973 0.60500 antsCortic pcook r 05/20/2014 13:32:47
>> [email protected] 2
>> 35974 0.60500 antsCortic pcook r 05/20/2014 13:35:31
>> [email protected] 2
>> 35975 0.60500 antsCortic pcook r 05/20/2014 14:21:19
>> [email protected] 2
>>
>> [root@chead ~]# qconf -sql
>> all.q
>> qlogin.long.q
>> qlogin.q
>>
>> [root@chead ~]# qconf -sq all.q | grep -e type -e pe_list
>> qtype BATCH
>> pe_list make mpich mpi orte unihost serial
>>
>> [root@chead ~]# qconf -sq qlogin.q | grep -e type -e pe_list
>> qtype INTERACTIVE
>> pe_list make unihost serial
>>
>> [root@chead ~]# qconf -sq qlogin.long.q | grep -e type -e pe_list
>> qtype INTERACTIVE
>> pe_list make unihost serial
>>
>> [root@chead ~]# qconf -srqs
>> {
>> name limit_user_interactive_slots
>> description Limit the users' interactive slots based
>> enabled TRUE
>> limit users {*} queues {qlogin.q,qlogin.long.q} to slots=6
>> }
>> {
>> name limit_user_slots
>> description Limit the users' batch slots
>> enabled TRUE
>> limit users {*} queues {all.q} to slots=32
>> }
>>
>> [root@chead ~]# qconf -sp unihost
>> pe_name unihost
>> slots 9999
>> user_lists NONE
>> xuser_lists NONE
>> start_proc_args /bin/true
>> stop_proc_args /bin/true
>> allocation_rule $pe_slots
>> control_slaves FALSE
>> job_is_first_task TRUE
>> urgency_slots min
>> accounting_summary FALSE
>>
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>
>
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