Hi
today I tried to install openmpi-1.9r28290 and got the following errors.
Solaris 10, Sparc, Sun C 5.12, 32-bit version of openmpi
Solaris 10, x86_64, Sun C 5.12, 32-bit version of openmpi
Solaris 10, Sparc, Sun C 5.12, 64-bit version of openmpi
Solaris 10, x86_64, Sun C 5.12, 64-bit version of openmpi
---------------------------------------------------------
...
CC topology-solaris.lo
"../../../../../../../openmpi-1.9r28290/opal/mca/hwloc/hwloc152/hwloc/src/topolo
gy-solaris.c", line 226: undefined symbol: binding
"../../../../../../../openmpi-1.9r28290/opal/mca/hwloc/hwloc152/hwloc/src/topolo
gy-solaris.c", line 227: undefined symbol: hwloc_set
"../../../../../../../openmpi-1.9r28290/opal/mca/hwloc/hwloc152/hwloc/src/topolo
gy-solaris.c", line 227: warning: improper pointer/integer combination: arg #1
cc: acomp failed for ../../../../../../../openmpi-1.9r28290/opal/mca/hwloc/hwloc
152/hwloc/src/topology-solaris.c
make[4]: *** [topology-solaris.lo] Error 1
...
openSuSE Linux 12.1, x86_64, Sun C 5.12, 32-bit version of openmpi
openSuSE Linux 12.1, x86_64, Sun C 5.12, 64-bit version of openmpi
------------------------------------------------------------------
...
PPFC mpi-f08-sizeof.lo
PPFC mpi-f08.lo
"../../../../../openmpi-1.9r28290/ompi/mpi/fortran/use-mpi-f08/mpi-f08.F90", Lin
e = 1, Column = 1: INTERNAL: Interrupt: Segmentation fault
make[2]: *** [mpi-f08.lo] Error 1
make[2]: Leaving directory `/export2/src/openmpi-1.9/openmpi-1.9-Linux.x86_64.32
_cc/ompi/mpi/fortran/use-mpi-f08'
make[1]: *** [all-recursive] Error 1
...
I could built an older version.
Package: Open MPI root@linpc1 Distribution
Open MPI: 1.9r28209
Open MPI repo revision: r28209
Open MPI release date: Mar 25, 2013 (nightly snapshot tarball)
Open RTE: 1.9
Open RTE repo revision: r28134M
Open RTE release date: Feb 28, 2013
OPAL: 1.9
OPAL repo revision: r28134M
OPAL release date: Feb 28, 2013
MPI API: 2.1
Ident string: 1.9r28209
Prefix: /usr/local/ompi-java_64_cc
Configured architecture: x86_64-unknown-linux-gnu
Configure host: linpc1
Configured by: root
Configured on: Tue Mar 26 15:54:59 CET 2013
Configure host: linpc1
Built by: root
Built on: Tue Mar 26 16:31:01 CET 2013
Built host: linpc1
C bindings: yes
C++ bindings: yes
Fort mpif.h: yes (all)
Fort use mpi: yes (full: ignore TKR)
Fort use mpi size: deprecated-ompi-info-value
Fort use mpi_f08: yes
Fort mpi_f08 compliance: The mpi_f08 module is available, but due to
limitations in the f95 compiler, does not support the following: array
subsections, ABSTRACT INTERFACE function pointers, Fortran '08-specified
ASYNCHRONOUS behavior, PROCEDUREs, direct passthru (where possible) to
underlying Open MPI's C functionality
Fort mpi_f08 subarrays: no
Java bindings: yes
C compiler: cc
C compiler absolute: /opt/solstudio12.3/bin/cc
C compiler family name: SUN
C compiler version: 0x5120
C++ compiler: CC
C++ compiler absolute: /opt/solstudio12.3/bin/CC
Fort compiler: f95
Fort compiler abs: /opt/solstudio12.3/bin/f95
Fort ignore TKR: yes (!$PRAGMA IGNORE_TKR)
Fort 08 assumed shape: no
Fort optional args: yes
Fort BIND(C): yes
Fort PRIVATE: yes
Fort ABSTRACT: no
Fort ASYNCHRONOUS: no
Fort PROCEDURE: no
Fort f08 using wrappers: yes
C profiling: yes
C++ profiling: yes
Fort mpif.h profiling: yes
Fort use mpi profiling: yes
Fort use mpi_f08 prof: yes
C++ exceptions: yes
Thread support: posix (MPI_THREAD_MULTIPLE: yes, OPAL support: yes,
OMPI progress: no, ORTE progress: no, Event lib: no)
Sparse Groups: no
Internal debug support: yes
MPI interface warnings: yes
MPI parameter check: runtime
Memory profiling support: no
Memory debugging support: no
libltdl support: yes
Heterogeneous support: yes
mpirun default --prefix: no
MPI I/O support: yes
MPI_WTIME support: gettimeofday
Symbol vis. support: yes
Host topology support: yes
MPI extensions:
FT Checkpoint support: no (checkpoint thread: no)
C/R Enabled Debugging: no
VampirTrace support: yes
MPI_MAX_PROCESSOR_NAME: 256
MPI_MAX_ERROR_STRING: 256
MPI_MAX_OBJECT_NAME: 64
MPI_MAX_INFO_KEY: 36
MPI_MAX_INFO_VAL: 256
MPI_MAX_PORT_NAME: 1024
MPI_MAX_DATAREP_STRING: 128
MCA backtrace: execinfo (MCA v2.0, API v2.0, Component v1.9)
MCA event: libevent2019 (MCA v2.0, API v2.0, Component v1.9)
MCA hwloc: hwloc152 (MCA v2.0, API v2.0, Component v1.9)
MCA if: linux_ipv6 (MCA v2.0, API v2.0, Component v1.9)
MCA if: posix_ipv4 (MCA v2.0, API v2.0, Component v1.9)
MCA installdirs: env (MCA v2.0, API v2.0, Component v1.9)
MCA installdirs: config (MCA v2.0, API v2.0, Component v1.9)
MCA memory: linux (MCA v2.0, API v2.0, Component v1.9)
MCA shmem: mmap (MCA v2.0, API v2.0, Component v1.9)
MCA shmem: posix (MCA v2.0, API v2.0, Component v1.9)
MCA shmem: sysv (MCA v2.0, API v2.0, Component v1.9)
MCA timer: linux (MCA v2.0, API v2.0, Component v1.9)
MCA dfs: app (MCA v2.0, API v1.0, Component v1.9)
MCA dfs: orted (MCA v2.0, API v1.0, Component v1.9)
MCA dfs: test (MCA v2.0, API v1.0, Component v1.9)
MCA errmgr: default_app (MCA v2.0, API v3.0, Component v1.9)
MCA errmgr: default_hnp (MCA v2.0, API v3.0, Component v1.9)
MCA errmgr: default_orted (MCA v2.0, API v3.0, Component v1.9)
MCA ess: env (MCA v2.0, API v3.0, Component v1.9)
MCA ess: hnp (MCA v2.0, API v3.0, Component v1.9)
MCA ess: singleton (MCA v2.0, API v3.0, Component v1.9)
MCA ess: slurm (MCA v2.0, API v3.0, Component v1.9)
MCA ess: tool (MCA v2.0, API v3.0, Component v1.9)
MCA filem: raw (MCA v2.0, API v2.0, Component v1.9)
MCA filem: rsh (MCA v2.0, API v2.0, Component v1.9)
MCA grpcomm: bad (MCA v2.0, API v2.0, Component v1.9)
MCA iof: hnp (MCA v2.0, API v2.0, Component v1.9)
MCA iof: mr_hnp (MCA v2.0, API v2.0, Component v1.9)
MCA iof: mr_orted (MCA v2.0, API v2.0, Component v1.9)
MCA iof: orted (MCA v2.0, API v2.0, Component v1.9)
MCA iof: tool (MCA v2.0, API v2.0, Component v1.9)
MCA odls: default (MCA v2.0, API v2.0, Component v1.9)
MCA oob: tcp (MCA v2.0, API v2.0, Component v1.9)
MCA plm: rsh (MCA v2.0, API v2.0, Component v1.9)
MCA plm: slurm (MCA v2.0, API v2.0, Component v1.9)
MCA ras: loadleveler (MCA v2.0, API v2.0, Component v1.9)
MCA ras: simulator (MCA v2.0, API v2.0, Component v1.9)
MCA ras: slurm (MCA v2.0, API v2.0, Component v1.9)
MCA rmaps: lama (MCA v2.0, API v2.0, Component v1.9)
MCA rmaps: ppr (MCA v2.0, API v2.0, Component v1.9)
MCA rmaps: rank_file (MCA v2.0, API v2.0, Component v1.9)
MCA rmaps: resilient (MCA v2.0, API v2.0, Component v1.9)
MCA rmaps: round_robin (MCA v2.0, API v2.0, Component v1.9)
MCA rmaps: seq (MCA v2.0, API v2.0, Component v1.9)
MCA rmaps: staged (MCA v2.0, API v2.0, Component v1.9)
MCA rml: oob (MCA v2.0, API v2.0, Component v1.9)
MCA routed: binomial (MCA v2.0, API v2.0, Component v1.9)
MCA routed: debruijn (MCA v2.0, API v2.0, Component v1.9)
MCA routed: direct (MCA v2.0, API v2.0, Component v1.9)
MCA routed: radix (MCA v2.0, API v2.0, Component v1.9)
MCA state: app (MCA v2.0, API v1.0, Component v1.9)
MCA state: hnp (MCA v2.0, API v1.0, Component v1.9)
MCA state: novm (MCA v2.0, API v1.0, Component v1.9)
MCA state: orted (MCA v2.0, API v1.0, Component v1.9)
MCA state: staged_hnp (MCA v2.0, API v1.0, Component v1.9)
MCA state: staged_orted (MCA v2.0, API v1.0, Component v1.9)
MCA allocator: basic (MCA v2.0, API v2.0, Component v1.9)
MCA allocator: bucket (MCA v2.0, API v2.0, Component v1.9)
MCA bml: r2 (MCA v2.0, API v2.0, Component v1.9)
MCA btl: self (MCA v2.0, API v2.0, Component v1.9)
MCA btl: sm (MCA v2.0, API v2.0, Component v1.9)
MCA btl: tcp (MCA v2.0, API v2.0, Component v1.9)
MCA coll: basic (MCA v2.0, API v2.0, Component v1.9)
MCA coll: hierarch (MCA v2.0, API v2.0, Component v1.9)
MCA coll: inter (MCA v2.0, API v2.0, Component v1.9)
MCA coll: libnbc (MCA v2.0, API v2.0, Component v1.9)
MCA coll: self (MCA v2.0, API v2.0, Component v1.9)
MCA coll: sm (MCA v2.0, API v2.0, Component v1.9)
MCA coll: tuned (MCA v2.0, API v2.0, Component v1.9)
MCA fbtl: posix (MCA v2.0, API v2.0, Component v1.9)
MCA fcoll: dynamic (MCA v2.0, API v2.0, Component v1.9)
MCA fcoll: individual (MCA v2.0, API v2.0, Component v1.9)
MCA fcoll: static (MCA v2.0, API v2.0, Component v1.9)
MCA fcoll: two_phase (MCA v2.0, API v2.0, Component v1.9)
MCA fcoll: ylib (MCA v2.0, API v2.0, Component v1.9)
MCA fs: ufs (MCA v2.0, API v2.0, Component v1.9)
MCA io: ompio (MCA v2.0, API v2.0, Component v1.9)
MCA io: romio (MCA v2.0, API v2.0, Component v1.9)
MCA mpool: grdma (MCA v2.0, API v2.0, Component v1.9)
MCA mpool: sm (MCA v2.0, API v2.0, Component v1.9)
MCA osc: pt2pt (MCA v2.0, API v2.0, Component v1.9)
MCA osc: rdma (MCA v2.0, API v2.0, Component v1.9)
MCA pml: v (MCA v2.0, API v2.0, Component v1.9)
MCA pml: bfo (MCA v2.0, API v2.0, Component v1.9)
MCA pml: dr (MCA v2.0, API v2.0, Component v1.9)
MCA pml: ob1 (MCA v2.0, API v2.0, Component v1.9)
MCA rcache: vma (MCA v2.0, API v2.0, Component v1.9)
MCA sharedfp: dummy (MCA v2.0, API v2.0, Component v1.9)
MCA topo: unity (MCA v2.0, API v2.0, Component v1.9)
I would be grateful, if somebody can fix the problems. Thank you
very much for any help in advance.
Kind regards
Siegmar
