On Apr 5, 2013, at 12:33 AM, Siegmar Gross <siegmar.gr...@informatik.hs-fulda.de> wrote:
> Hi > > today I tried to install openmpi-1.9r28290 and got the following errors. > > Solaris 10, Sparc, Sun C 5.12, 32-bit version of openmpi > Solaris 10, x86_64, Sun C 5.12, 32-bit version of openmpi > Solaris 10, Sparc, Sun C 5.12, 64-bit version of openmpi > Solaris 10, x86_64, Sun C 5.12, 64-bit version of openmpi > --------------------------------------------------------- > > ... > CC topology-solaris.lo > "../../../../../../../openmpi-1.9r28290/opal/mca/hwloc/hwloc152/hwloc/src/topolo > gy-solaris.c", line 226: undefined symbol: binding > "../../../../../../../openmpi-1.9r28290/opal/mca/hwloc/hwloc152/hwloc/src/topolo > gy-solaris.c", line 227: undefined symbol: hwloc_set > "../../../../../../../openmpi-1.9r28290/opal/mca/hwloc/hwloc152/hwloc/src/topolo > gy-solaris.c", line 227: warning: improper pointer/integer combination: arg #1 > cc: acomp failed for > ../../../../../../../openmpi-1.9r28290/opal/mca/hwloc/hwloc > 152/hwloc/src/topology-solaris.c > make[4]: *** [topology-solaris.lo] Error 1 > ... > Found a missing variable declaration - try with r28293 or above. > > > > openSuSE Linux 12.1, x86_64, Sun C 5.12, 32-bit version of openmpi > openSuSE Linux 12.1, x86_64, Sun C 5.12, 64-bit version of openmpi > ------------------------------------------------------------------ > > ... > PPFC mpi-f08-sizeof.lo > PPFC mpi-f08.lo > "../../../../../openmpi-1.9r28290/ompi/mpi/fortran/use-mpi-f08/mpi-f08.F90", > Lin > e = 1, Column = 1: INTERNAL: Interrupt: Segmentation fault > make[2]: *** [mpi-f08.lo] Error 1 > make[2]: Leaving directory > `/export2/src/openmpi-1.9/openmpi-1.9-Linux.x86_64.32 > _cc/ompi/mpi/fortran/use-mpi-f08' > make[1]: *** [all-recursive] Error 1 > ... > I have to defer the Fortran stuff to Jeff. > > I could built an older version. > > Package: Open MPI root@linpc1 Distribution > Open MPI: 1.9r28209 > Open MPI repo revision: r28209 > Open MPI release date: Mar 25, 2013 (nightly snapshot tarball) > Open RTE: 1.9 > Open RTE repo revision: r28134M > Open RTE release date: Feb 28, 2013 > OPAL: 1.9 > OPAL repo revision: r28134M > OPAL release date: Feb 28, 2013 > MPI API: 2.1 > Ident string: 1.9r28209 > Prefix: /usr/local/ompi-java_64_cc > Configured architecture: x86_64-unknown-linux-gnu > Configure host: linpc1 > Configured by: root > Configured on: Tue Mar 26 15:54:59 CET 2013 > Configure host: linpc1 > Built by: root > Built on: Tue Mar 26 16:31:01 CET 2013 > Built host: linpc1 > C bindings: yes > C++ bindings: yes > Fort mpif.h: yes (all) > Fort use mpi: yes (full: ignore TKR) > Fort use mpi size: deprecated-ompi-info-value > Fort use mpi_f08: yes > Fort mpi_f08 compliance: The mpi_f08 module is available, but due to > limitations in the f95 compiler, does not support the following: array > subsections, ABSTRACT INTERFACE function pointers, Fortran '08-specified > ASYNCHRONOUS behavior, PROCEDUREs, direct passthru (where possible) to > underlying Open MPI's C functionality > Fort mpi_f08 subarrays: no > Java bindings: yes > C compiler: cc > C compiler absolute: /opt/solstudio12.3/bin/cc > C compiler family name: SUN > C compiler version: 0x5120 > C++ compiler: CC > C++ compiler absolute: /opt/solstudio12.3/bin/CC > Fort compiler: f95 > Fort compiler abs: /opt/solstudio12.3/bin/f95 > Fort ignore TKR: yes (!$PRAGMA IGNORE_TKR) > Fort 08 assumed shape: no > Fort optional args: yes > Fort BIND(C): yes > Fort PRIVATE: yes > Fort ABSTRACT: no > Fort ASYNCHRONOUS: no > Fort PROCEDURE: no > Fort f08 using wrappers: yes > C profiling: yes > C++ profiling: yes > Fort mpif.h profiling: yes > Fort use mpi profiling: yes > Fort use mpi_f08 prof: yes > C++ exceptions: yes > Thread support: posix (MPI_THREAD_MULTIPLE: yes, OPAL support: yes, > OMPI progress: no, ORTE progress: no, Event lib: no) > Sparse Groups: no > Internal debug support: yes > MPI interface warnings: yes > MPI parameter check: runtime > Memory profiling support: no > Memory debugging support: no > libltdl support: yes > Heterogeneous support: yes > mpirun default --prefix: no > MPI I/O support: yes > MPI_WTIME support: gettimeofday > Symbol vis. support: yes > Host topology support: yes > MPI extensions: > FT Checkpoint support: no (checkpoint thread: no) > C/R Enabled Debugging: no > VampirTrace support: yes > MPI_MAX_PROCESSOR_NAME: 256 > MPI_MAX_ERROR_STRING: 256 > MPI_MAX_OBJECT_NAME: 64 > MPI_MAX_INFO_KEY: 36 > MPI_MAX_INFO_VAL: 256 > MPI_MAX_PORT_NAME: 1024 > MPI_MAX_DATAREP_STRING: 128 > MCA backtrace: execinfo (MCA v2.0, API v2.0, Component v1.9) > MCA event: libevent2019 (MCA v2.0, API v2.0, Component v1.9) > MCA hwloc: hwloc152 (MCA v2.0, API v2.0, Component v1.9) > MCA if: linux_ipv6 (MCA v2.0, API v2.0, Component v1.9) > MCA if: posix_ipv4 (MCA v2.0, API v2.0, Component v1.9) > MCA installdirs: env (MCA v2.0, API v2.0, Component v1.9) > MCA installdirs: config (MCA v2.0, API v2.0, Component v1.9) > MCA memory: linux (MCA v2.0, API v2.0, Component v1.9) > MCA shmem: mmap (MCA v2.0, API v2.0, Component v1.9) > MCA shmem: posix (MCA v2.0, API v2.0, Component v1.9) > MCA shmem: sysv (MCA v2.0, API v2.0, Component v1.9) > MCA timer: linux (MCA v2.0, API v2.0, Component v1.9) > MCA dfs: app (MCA v2.0, API v1.0, Component v1.9) > MCA dfs: orted (MCA v2.0, API v1.0, Component v1.9) > MCA dfs: test (MCA v2.0, API v1.0, Component v1.9) > MCA errmgr: default_app (MCA v2.0, API v3.0, Component v1.9) > MCA errmgr: default_hnp (MCA v2.0, API v3.0, Component v1.9) > MCA errmgr: default_orted (MCA v2.0, API v3.0, Component v1.9) > MCA ess: env (MCA v2.0, API v3.0, Component v1.9) > MCA ess: hnp (MCA v2.0, API v3.0, Component v1.9) > MCA ess: singleton (MCA v2.0, API v3.0, Component v1.9) > MCA ess: slurm (MCA v2.0, API v3.0, Component v1.9) > MCA ess: tool (MCA v2.0, API v3.0, Component v1.9) > MCA filem: raw (MCA v2.0, API v2.0, Component v1.9) > MCA filem: rsh (MCA v2.0, API v2.0, Component v1.9) > MCA grpcomm: bad (MCA v2.0, API v2.0, Component v1.9) > MCA iof: hnp (MCA v2.0, API v2.0, Component v1.9) > MCA iof: mr_hnp (MCA v2.0, API v2.0, Component v1.9) > MCA iof: mr_orted (MCA v2.0, API v2.0, Component v1.9) > MCA iof: orted (MCA v2.0, API v2.0, Component v1.9) > MCA iof: tool (MCA v2.0, API v2.0, Component v1.9) > MCA odls: default (MCA v2.0, API v2.0, Component v1.9) > MCA oob: tcp (MCA v2.0, API v2.0, Component v1.9) > MCA plm: rsh (MCA v2.0, API v2.0, Component v1.9) > MCA plm: slurm (MCA v2.0, API v2.0, Component v1.9) > MCA ras: loadleveler (MCA v2.0, API v2.0, Component v1.9) > MCA ras: simulator (MCA v2.0, API v2.0, Component v1.9) > MCA ras: slurm (MCA v2.0, API v2.0, Component v1.9) > MCA rmaps: lama (MCA v2.0, API v2.0, Component v1.9) > MCA rmaps: ppr (MCA v2.0, API v2.0, Component v1.9) > MCA rmaps: rank_file (MCA v2.0, API v2.0, Component v1.9) > MCA rmaps: resilient (MCA v2.0, API v2.0, Component v1.9) > MCA rmaps: round_robin (MCA v2.0, API v2.0, Component v1.9) > MCA rmaps: seq (MCA v2.0, API v2.0, Component v1.9) > MCA rmaps: staged (MCA v2.0, API v2.0, Component v1.9) > MCA rml: oob (MCA v2.0, API v2.0, Component v1.9) > MCA routed: binomial (MCA v2.0, API v2.0, Component v1.9) > MCA routed: debruijn (MCA v2.0, API v2.0, Component v1.9) > MCA routed: direct (MCA v2.0, API v2.0, Component v1.9) > MCA routed: radix (MCA v2.0, API v2.0, Component v1.9) > MCA state: app (MCA v2.0, API v1.0, Component v1.9) > MCA state: hnp (MCA v2.0, API v1.0, Component v1.9) > MCA state: novm (MCA v2.0, API v1.0, Component v1.9) > MCA state: orted (MCA v2.0, API v1.0, Component v1.9) > MCA state: staged_hnp (MCA v2.0, API v1.0, Component v1.9) > MCA state: staged_orted (MCA v2.0, API v1.0, Component v1.9) > MCA allocator: basic (MCA v2.0, API v2.0, Component v1.9) > MCA allocator: bucket (MCA v2.0, API v2.0, Component v1.9) > MCA bml: r2 (MCA v2.0, API v2.0, Component v1.9) > MCA btl: self (MCA v2.0, API v2.0, Component v1.9) > MCA btl: sm (MCA v2.0, API v2.0, Component v1.9) > MCA btl: tcp (MCA v2.0, API v2.0, Component v1.9) > MCA coll: basic (MCA v2.0, API v2.0, Component v1.9) > MCA coll: hierarch (MCA v2.0, API v2.0, Component v1.9) > MCA coll: inter (MCA v2.0, API v2.0, Component v1.9) > MCA coll: libnbc (MCA v2.0, API v2.0, Component v1.9) > MCA coll: self (MCA v2.0, API v2.0, Component v1.9) > MCA coll: sm (MCA v2.0, API v2.0, Component v1.9) > MCA coll: tuned (MCA v2.0, API v2.0, Component v1.9) > MCA fbtl: posix (MCA v2.0, API v2.0, Component v1.9) > MCA fcoll: dynamic (MCA v2.0, API v2.0, Component v1.9) > MCA fcoll: individual (MCA v2.0, API v2.0, Component v1.9) > MCA fcoll: static (MCA v2.0, API v2.0, Component v1.9) > MCA fcoll: two_phase (MCA v2.0, API v2.0, Component v1.9) > MCA fcoll: ylib (MCA v2.0, API v2.0, Component v1.9) > MCA fs: ufs (MCA v2.0, API v2.0, Component v1.9) > MCA io: ompio (MCA v2.0, API v2.0, Component v1.9) > MCA io: romio (MCA v2.0, API v2.0, Component v1.9) > MCA mpool: grdma (MCA v2.0, API v2.0, Component v1.9) > MCA mpool: sm (MCA v2.0, API v2.0, Component v1.9) > MCA osc: pt2pt (MCA v2.0, API v2.0, Component v1.9) > MCA osc: rdma (MCA v2.0, API v2.0, Component v1.9) > MCA pml: v (MCA v2.0, API v2.0, Component v1.9) > MCA pml: bfo (MCA v2.0, API v2.0, Component v1.9) > MCA pml: dr (MCA v2.0, API v2.0, Component v1.9) > MCA pml: ob1 (MCA v2.0, API v2.0, Component v1.9) > MCA rcache: vma (MCA v2.0, API v2.0, Component v1.9) > MCA sharedfp: dummy (MCA v2.0, API v2.0, Component v1.9) > MCA topo: unity (MCA v2.0, API v2.0, Component v1.9) > > > I would be grateful, if somebody can fix the problems. Thank you > very much for any help in advance. > > > Kind regards > > Siegmar > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users
