Hi, > Am 03.02.2017 um 17:10 schrieb Mark Dixon <m.c.di...@leeds.ac.uk>: > > Hi, > > Just tried upgrading from 2.0.1 to 2.0.2 and I'm getting error messages that > look like openmpi is using ssh to login to remote nodes instead of qrsh (see > below). Has anyone else noticed gridengine integration being broken, or am I > being dumb? > > I built with "./configure > --prefix=/apps/developers/libraries/openmpi/2.0.2/1/intel-17.0.1 --with-sge > --with-io-romio-flags=--with-file-system=lustre+ufs --enable-mpi-cxx > --with-cma"
SGE on its own is not configured to use SSH? (I mean the entries in `qconf -sconf` for rsh_command resp. daemon). -- Reuti > Can see the gridengine component via: > > $ ompi_info -a | grep gridengine > MCA ras: gridengine (MCA v2.1.0, API v2.0.0, Component v2.0.2) > MCA ras gridengine: --------------------------------------------------- > MCA ras gridengine: parameter "ras_gridengine_priority" (current value: > "100", data source: default, level: 9 dev/all, type: int) > Priority of the gridengine ras component > MCA ras gridengine: parameter "ras_gridengine_verbose" (current value: > "0", data source: default, level: 9 dev/all, type: int) > Enable verbose output for the gridengine ras > component > MCA ras gridengine: parameter "ras_gridengine_show_jobid" (current > value: "false", data source: default, level: 9 dev/all, type: bool) > > Cheers, > > Mark > > ssh_askpass: exec(/usr/libexec/openssh/ssh-askpass): No such file or directory > Permission denied, please try again. > ssh_askpass: exec(/usr/libexec/openssh/ssh-askpass): No such file or directory > Permission denied, please try again. > ssh_askpass: exec(/usr/libexec/openssh/ssh-askpass): No such file or directory > Permission denied (publickey,gssapi-keyex,gssapi-with-mic,password,hostbased). > -------------------------------------------------------------------------- > ORTE was unable to reliably start one or more daemons. > This usually is caused by: > > * not finding the required libraries and/or binaries on > one or more nodes. Please check your PATH and LD_LIBRARY_PATH > settings, or configure OMPI with --enable-orterun-prefix-by-default > > * lack of authority to execute on one or more specified nodes. > Please verify your allocation and authorities. > > * the inability to write startup files into /tmp (--tmpdir/orte_tmpdir_base). > Please check with your sys admin to determine the correct location to use. > > * compilation of the orted with dynamic libraries when static are required > (e.g., on Cray). Please check your configure cmd line and consider using > one of the contrib/platform definitions for your system type. > > * an inability to create a connection back to mpirun due to a > lack of common network interfaces and/or no route found between > them. Please check network connectivity (including firewalls > and network routing requirements). > -------------------------------------------------------------------------- > > _______________________________________________ > users mailing list > users@lists.open-mpi.org > https://rfd.newmexicoconsortium.org/mailman/listinfo/users
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