Hi Charles and All: Happy new year! I have some basic knowledge about python programming and xplor-NIH. It is always a mystery to me how atom coordinates are passed to IVM or other downstream objects. For example, we usually load psf and generate starting extended structure by protocol.initStruct and protocol.genExtendedStructure(). For most python programing, we need a variable to hold the data in python, whether it is class, string or something else. From protocol.initStruct or protocol.genExtendedStructure(), I don't understand what variable hold the class type data. I also checked the codes under python directory for these modules, like protocol, ivm. I just could not find how the coordinate information is stored and how other modules or methods read this information.
Thank you! Jun ######################################################################## To unsubscribe from the XPLOR-NIH list, click the following link: http://list.nih.gov/cgi-bin/wa.exe?SUBED1=XPLOR-NIH&A=1
