Thanks for sharing these logs.
The key failure is here:

configure:3938: x86_64-apple-darwin13.4.0-clang -march=core2 -mtune=haswell 
-mssse3 -ftree-vectorize -fPIC -fstack-protector-strong -O2 -pipe -isystem 
/Users/user/anaconda3/include -D_FORTIFY_SOURCE=2 -isystem 
/Users/user/anaconda3/include 
-L/Users/user/.sage/sage-10.2-Darwin-x86_64/local/lib 
-Wl,-ld_classic,-rpath,/Users/user/.sage/sage-10.2-Darwin-x86_64/local/lib 
-L/Users/user/.sage/sage-10.2-Darwin-x86_64/local/lib 
-Wl,-ld_classic,-rpath,/Users/user/.sage/sage-10.2-Darwin-x86_64/local/lib 
-Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs 
-Wl,-rpath,/Users/user/anaconda3/lib -L/Users/user/anaconda3/lib conftest.c 
 >&5
ld: library not found for -ld_classic
clang-16: error: linker command failed with exit code 1 (use -v to see 
invocation)

What's happening here is that a workaround that we use on macOS for 
compilation with XCode is incompatible with the conda toolchain.
I have a fix for this in https://github.com/sagemath/sage/pull/37237

For now, if you want to use the installation method using "pip install 
sage_conf", deactivate conda first.
Or alternatively if you want to use conda, use one of the installation 
methods described 
in https://doc.sagemath.org/html/en/installation/conda.html


On Tuesday, February 6, 2024 at 4:10:53 PM UTC-8 Sai Chandhrasekhar wrote:

> I also tried to run the install command again with the --pre flag and got 
> the same result. 
>
> On Tuesday, February 6, 2024 at 5:54:11 PM UTC-6 Sai Chandhrasekhar wrote:
>
>> On Tuesday, February 6, 2024 at 5:14:56 PM UTC-6 Matthias Koeppe wrote:
>>
>>>
>>> and 
>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/local/var/tmp/sage/build/libatomic_ops-7.8.0/src/config.log
>>>  
>>> please
>>>
>>> On Tuesday, February 6, 2024 at 2:36:21 PM UTC-8 Sai Chandhrasekhar 
>>> wrote:
>>>
>>>> On Tuesday, February 6, 2024 at 4:22:59 PM UTC-6 Matthias Koeppe wrote:
>>>>
>>>>> Could you post one of these log files please? For example info-6.8.log
>>>>>
>>>>> And could you try "python3 -m pip install --pre sage_conf" also?
>>>>>
>>>>> On Tuesday, February 6, 2024 at 12:15:08 PM UTC-8 Sai Chandhrasekhar 
>>>>> wrote:
>>>>>
>>>>>> When I ran python3 -m pip install sage_conf I got this error message:
>>>>>>
>>>>>> Error building Sage.
>>>>>>
>>>>>>       
>>>>>>
>>>>>>       The following package(s) may have failed to build (not 
>>>>>> necessarily
>>>>>>
>>>>>>       during this run of 'make all-build'):
>>>>>>
>>>>>>       
>>>>>>
>>>>>>       * package:         gf2x-1.3.0
>>>>>>
>>>>>>         last build time: Feb 6 14:07
>>>>>>
>>>>>>         log file:        
>>>>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/logs/pkgs/gf2x-1.3.0.log
>>>>>>
>>>>>>         build directory: 
>>>>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/local/var/tmp/sage/build/gf2x-1.3.0
>>>>>>
>>>>>>       
>>>>>>
>>>>>>       * package:         cddlib-0.94m
>>>>>>
>>>>>>         last build time: Feb 6 14:07
>>>>>>
>>>>>>         log file:        
>>>>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/logs/pkgs/cddlib-0.94m.log
>>>>>>
>>>>>>         build directory: 
>>>>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/local/var/tmp/sage/build/cddlib-0.94m
>>>>>>
>>>>>>       
>>>>>>
>>>>>>       * package:         cliquer-1.22
>>>>>>
>>>>>>         last build time: Feb 6 14:07
>>>>>>
>>>>>>         log file:        
>>>>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/logs/pkgs/cliquer-1.22.log
>>>>>>
>>>>>>         build directory: 
>>>>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/local/var/tmp/sage/build/cliquer-1.22
>>>>>>
>>>>>>       
>>>>>>
>>>>>>       * package:         libatomic_ops-7.8.0
>>>>>>
>>>>>>         last build time: Feb 6 14:07
>>>>>>
>>>>>>         log file:        
>>>>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/logs/pkgs/libatomic_ops-7.8.0.log
>>>>>>
>>>>>>         build directory: 
>>>>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/local/var/tmp/sage/build/libatomic_ops-7.8.0
>>>>>>
>>>>>>       
>>>>>>
>>>>>>       * package:         m4ri-20200115
>>>>>>
>>>>>>         last build time: Feb 6 14:07
>>>>>>
>>>>>>         log file:        
>>>>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/logs/pkgs/m4ri-20200115.log
>>>>>>
>>>>>>         build directory: 
>>>>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/local/var/tmp/sage/build/m4ri-20200115
>>>>>>
>>>>>>       
>>>>>>
>>>>>>       * package:         ecm-7.0.5
>>>>>>
>>>>>>         last build time: Feb 6 14:07
>>>>>>
>>>>>>         log file:        
>>>>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/logs/pkgs/ecm-7.0.5.log
>>>>>>
>>>>>>         build directory: 
>>>>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/local/var/tmp/sage/build/ecm-7.0.5
>>>>>>
>>>>>>       
>>>>>>
>>>>>>       * package:         info-6.8
>>>>>>
>>>>>>         last build time: Feb 6 14:07
>>>>>>
>>>>>>         log file:        
>>>>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/logs/pkgs/info-6.8.log
>>>>>>
>>>>>>         build directory: 
>>>>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/local/var/tmp/sage/build/info-6.8
>>>>>>
>>>>>>       
>>>>>>
>>>>>>       * package:         pari-2.15.4
>>>>>>
>>>>>>         last build time: Feb 6 14:08
>>>>>>
>>>>>>         log file:        
>>>>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/logs/pkgs/pari-2.15.4.log
>>>>>>
>>>>>>         build directory: 
>>>>>> /Users/user/.sage/sage-10.2-Darwin-x86_64/local/var/tmp/sage/build/pari-2.15.4
>>>>>>
>>>>>>
>>>>>> For those packages the following error message was printed earlier: 
>>>>>>
>>>>>> configure: error: C compiler cannot create executables
>>>>>>
>>>>>> On Tuesday, February 6, 2024 at 2:01:03 PM UTC-6 Matthias Koeppe 
>>>>>> wrote:
>>>>>>
>>>>>>> According to your config.log, the run of "configure" succeeded. 
>>>>>>> That config.log contains error messages from various compiler 
>>>>>>> invocations is a normal part of the configure process.
>>>>>>>
>>>>>>> What is the actual problem that you encountered?
>>>>>>>
>>>>>>>
>>>>>>> On Monday, February 5, 2024 at 2:58:36 PM UTC-8 Sai Chandhrasekhar 
>>>>>>> wrote:
>>>>>>>
>>>>>>>> On Monday, February 5, 2024 at 4:48:08 PM UTC-6 Dima Pasechnik 
>>>>>>>> wrote:
>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> On 5 February 2024 21:58:54 GMT, "dan...@gmail.com" <
>>>>>>>>> dan...@gmail.com> wrote: 
>>>>>>>>> >You could just use Sage_macOS 
>>>>>>>>> ><https://github.com/3-manifolds/Sage_macOS/releases/tag/v2.2.0>, 
>>>>>>>>> quick and 
>>>>>>>>> >easy! 
>>>>>>>>>
>>>>>>>>> for Sage development, you need a source install. 
>>>>>>>>>
>>>>>>>>> > 
>>>>>>>>> >On Monday, February 5, 2024 at 3:49:02 PM UTC-6 Matthias Koeppe 
>>>>>>>>> wrote: 
>>>>>>>>> > 
>>>>>>>>> >> We would need to see the full logs 
>>>>>>>>> >> 
>>>>>>>>> >> On Monday, February 5, 2024 at 1:26:31 PM UTC-8 Sai 
>>>>>>>>> Chandhrasekhar wrote: 
>>>>>>>>> >> 
>>>>>>>>> >>> Hello, 
>>>>>>>>> >>> 
>>>>>>>>> >>> When I tried to run python3 -m pip install sage_conf, I got 
>>>>>>>>> this error 
>>>>>>>>> >>> message from config.log. I tried to change to GCC but then I 
>>>>>>>>> got a message 
>>>>>>>>> >>> that Sage cannot be built on macOS with GNU's gcc. Any 
>>>>>>>>> suggestions on what 
>>>>>>>>> >>> to do would be appreciated. 
>>>>>>>>> >>> configure:6595: x86_64-apple-darwin13.4.0-clang -V >&5 
>>>>>>>>> >>> clang-16: error: argument to '-V' is missing (expected 1 
>>>>>>>>> value) 
>>>>>>>>> >>> clang-16: error: no input files 
>>>>>>>>> >>> configure:6606: $? = 1 
>>>>>>>>> >>> configure:6595: x86_64-apple-darwin13.4.0-clang -qversion >&5 
>>>>>>>>> >>> clang-16: error: unknown argument '-qversion'; did you mean 
>>>>>>>>> '--version'? 
>>>>>>>>> >>> clang-16: error: no input files 
>>>>>>>>> >>> configure:6606: $? = 1 
>>>>>>>>> >>> configure:6595: x86_64-apple-darwin13.4.0-clang -version >&5 
>>>>>>>>> >>> clang-16: error: unknown argument '-version'; did you mean 
>>>>>>>>> '--version'? 
>>>>>>>>> >>> clang-16: error: no input files 
>>>>>>>>> >>> 
>>>>>>>>> >> 
>>>>>>>>> > 
>>>>>>>>>
>>>>>>>>

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