configure:12690: g++ -E -std=gnu++11 -I/Volumes/Transcend/wooster/computer-algebra/anaconda3/include conftest.cpp
anaconda conflict? On Mon, Nov 4, 2019 at 5:37 PM David Joyner <wdjoy...@gmail.com> wrote: > > > > On Sun, Nov 3, 2019 at 11:07 AM Dima Pasechnik <dimp...@gmail.com> wrote: >> >> could you post config.log ? > > > It is attached. > >> >> >> On Sun, 3 Nov 2019, 15:03 David Joyner, <wdjoy...@gmail.com> wrote: >>> >>> >>> >>> On Sun, Nov 3, 2019 at 6:49 AM David Joyner <wdjoy...@gmail.com> wrote: >>>> >>>> >>>> >>>> On Sun, Nov 3, 2019 at 3:00 AM Dima Pasechnik <dimp...@gmail.com> wrote: >>>>> >>>>> looks like gd package didn't install right. >>>>> >>>>> you can install gd via Homebrew: >>>>> >>>>> https://formulae.brew.sh/formula/gd >>>>> >>>>> also, by the way, install pkg-config >>>>> >>>>> https://formulae.brew.sh/formula/pkg-config >>>>> >>>>> (it would be great if someone with well-working osx system updated >>>>> Installation guide to list names of Homebrew packages to match Sage ones, >>>>> listed on >>>>> https://trac.sagemath.org/ticket/27330) >>>>> >>>> >>>> I'll do that and try again. >>> >>> >>> This time it failed while compiling m4ri. >>> >>> >>> m4ri-20140914.p0] ld: library not found for -lpng12 >>> [m4ri-20140914.p0] clang: error: linker command failed with exit code 1 >>> (use -v to see invocation) >>> [m4ri-20140914.p0] make[5]: *** [libm4ri.la] Error 1 >>> [m4ri-20140914.p0] make[4]: *** [all] Error 2 >>> [m4ri-20140914.p0] >>> >>>> >>>> >>>> BTW, I added gdlib.pc to PKG_CONFIG_PATH and reran make. >>>> This time it got all the way to sagelib before stalling: >>>> >>>> [sagelib-9.0.beta3] >>>> /Volumes/Transcend/wooster/computer-algebra/sage-9.0.beta3/local/include/omalloc/omalloc.h:20:20: >>>> note: expanded from macro 'REGISTER' >>>> >>>> [sagelib-9.0.beta3] #define REGISTER register >>>> >>>> [sagelib-9.0.beta3] ^ >>>> >>>> [sagelib-9.0.beta3] 96 warnings generated. >>>> >>>> make[3]: *** [sagelib] Error 2 >>>> >>>> make[2]: *** [all-start] Error 2 >>>> >>>> >>>> >>>>> >>>>> >>>>> I also have formulas for flint and arb, they would be built from source >>>>> and installed in Homebrew structure. >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> On Sat, 2 Nov 2019, 23:46 David Joyner, <wdjoy...@gmail.com> wrote: >>>>>> >>>>>> >>>>>> >>>>>> On Fri, Nov 1, 2019 at 1:15 PM John H Palmieri <jhpalmier...@gmail.com> >>>>>> wrote: >>>>>>> >>>>>>> If you have the time, could you try uninstalling Xcode and then >>>>>>> reinstalling it? You might also try uninstalling and reinstalling >>>>>>> homebrew's gcc and any other homebrew components that are relevant to >>>>>>> Sage. There may be some remnants of previously installed software that >>>>>>> is somehow interfering. >>>>>>> >>>>>>> John >>>>>>> >>>>>> >>>>>> I uninstalled xcode (including the CL tools) then reinstalled the latest >>>>>> version >>>>>> (including the CL tools, which now go in a new directory). I also >>>>>> uninstalled and reinstalled >>>>>> homebrew. >>>>>> >>>>>> This time homebrew installed gcc fine. The compilation of sage-9.0b3 >>>>>> went fine until >>>>>> it hit brial-1.2.5. Then I got: >>>>>> >>>>>> [brial-1.2.5] Package gdlib was not found in the pkg-config search path. >>>>>> [brial-1.2.5] Perhaps you should add the directory containing `gdlib.pc' >>>>>> [brial-1.2.5] to the PKG_CONFIG_PATH environment variable >>>>>> [brial-1.2.5] Package 'gdlib', required by 'world', not found >>>>>> >>>>>> FWIW, I did find gdlib.pc in a directory of a non-working older sage: >>>>>> >>>>>> /Users/wdj/sagefiles/SageMath/local/lib/pkgconfig/gdlib.pc >>>>>> >>>>>> >>>>>> Any suggestions? >>>>>> >>>>>>> >>>>>>> On Wednesday, October 30, 2019 at 8:58:38 PM UTC-7, Andrew wrote: >>>>>>>> >>>>>>>> >>>>>>>> >>>>>>>> On Wednesday, 30 October 2019 23:27:45 UTC+11, Dima Pasechnik wrote: >>>>>>>>> >>>>>>>>> I meant cmath files without extensions. These are C++ header files. >>>>>>>>> It appears there are two such files on the list. Are they different? >>>>>>>>> >>>>>>>> In the interim have have installed homebrew's gcc to see if this >>>>>>>> helps, but it doesn't. The cmath files that I now have on my system >>>>>>>> are: >>>>>>>> >>>>>>>> -rw-r--r-- 1 root wheel 14515 23 Jul 03:08 >>>>>>>> /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/cmath >>>>>>>> -rw-r--r-- 1 root wheel 14515 23 Jul 03:08 >>>>>>>> /Library/Developer/CommandLineTools/usr/include/c++/v1/cmath >>>>>>>> >>>>>>>> As you suspected, these two files are identical. >>>>>>>> >>>>>>>> from homebrew's gcc: >>>>>>>> -rw-r--r-- 1 andrew staff 619 14 Aug 22:29 >>>>>>>> /usr/local/Cellar/boost/1.71.0/include/boost/compatibility/cpp_c_headers/cmath >>>>>>>> -rw-r--r-- 1 andrew staff 49094 12 Aug 17:58 >>>>>>>> /usr/local/Cellar/gcc/9.2.0_1/include/c++/9.2.0/cmath >>>>>>>> -rw-r--r-- 1 andrew staff 6570 12 Aug 17:58 >>>>>>>> /usr/local/Cellar/gcc/9.2.0_1/include/c++/9.2.0/ext/cmath >>>>>>>> -rw-r--r-- 1 andrew staff 43806 12 Aug 17:58 >>>>>>>> /usr/local/Cellar/gcc/9.2.0_1/include/c++/9.2.0/tr1/cmath >>>>>>>> -rw-r--r-- 1 andrew wheel 619 31 Oct 13:51 >>>>>>>> /usr/local/src/sage/local/include/boost/compatibility/cpp_c_headers/cmath >>>>>>>> >>>>>>>> Andrew >>>>>>>> >>>>>>> -- >>>>>>> You received this message because you are subscribed to the Google >>>>>>> Groups "sage-devel" group. >>>>>>> To unsubscribe from this group and stop receiving emails from it, send >>>>>>> an email to sage-devel+unsubscr...@googlegroups.com. >>>>>>> To view this discussion on the web visit >>>>>>> https://groups.google.com/d/msgid/sage-devel/181aab57-8e49-46f3-b758-45f700587410%40googlegroups.com. >>>>>> >>>>>> -- >>>>>> You received this message because you are subscribed to the Google >>>>>> Groups "sage-devel" group. >>>>>> To unsubscribe from this group and stop receiving emails from it, send >>>>>> an email to sage-devel+unsubscr...@googlegroups.com. >>>>>> To view this discussion on the web visit >>>>>> https://groups.google.com/d/msgid/sage-devel/CAEQuuAXWYFLxvsCuTMCmymAOYP%3D1XZjDKF6WiXLDOyLHdCa%2Bxg%40mail.gmail.com. >>>>> >>>>> -- >>>>> You received this message because you are subscribed to the Google Groups >>>>> "sage-devel" group. >>>>> To unsubscribe from this group and stop receiving emails from it, send an >>>>> email to sage-devel+unsubscr...@googlegroups.com. >>>>> To view this discussion on the web visit >>>>> https://groups.google.com/d/msgid/sage-devel/CAAWYfq2wz154s%2Brk4g7m9Wa2fMcav%2BMQJVJGmVGpBP1sQT0J2Q%40mail.gmail.com. >>> >>> -- >>> You received this message because you are subscribed to the Google Groups >>> "sage-devel" group. >>> To unsubscribe from this group and stop receiving emails from it, send an >>> email to sage-devel+unsubscr...@googlegroups.com. >>> To view this discussion on the web visit >>> https://groups.google.com/d/msgid/sage-devel/CAEQuuAXs%3D-qHz-gMPXmQFC_WSNMC_wX1LxEwmbBJq_pDKsp7iw%40mail.gmail.com. >> >> -- >> You received this message because you are subscribed to the Google Groups >> "sage-devel" group. >> To unsubscribe from this group and stop receiving emails from it, send an >> email to sage-devel+unsubscr...@googlegroups.com. >> To view this discussion on the web visit >> https://groups.google.com/d/msgid/sage-devel/CAAWYfq074xtHNpb%3DBbeUYOOsYy5NekS53N6HYSayp5615cW_3Q%40mail.gmail.com. > > -- > You received this message because you are subscribed to the Google Groups > "sage-devel" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to sage-devel+unsubscr...@googlegroups.com. > To view this discussion on the web visit > https://groups.google.com/d/msgid/sage-devel/CAEQuuAUUzbUrJSZrU15yfWoOAR5zSVPOFgqwAHTLGWF4J6Zgkg%40mail.gmail.com. -- You received this message because you are subscribed to the Google Groups "sage-devel" group. 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