On Sun, Oct 3, 2010 at 4:55 PM, <blackday...@gmail.com> claviota: > Ok, > > I wrote the command: require(adehabitat), then I obtained message: > > require(adehabitat) > Loading required package: adehabitat > Loading required package: ade4 > > Attaching package: 'ade4' > > The following object(s) are masked from 'package:base': > > within > > This package requires ade4 to be installed > > Type: > demo(rastermaps) for demonstration of raster map analysis > demo(homerange) for demonstration of home-range estimation > demo(managltraj) for demonstration of animals trajectory management > demo(analysisltraj) for demonstration of animals trajectory analysis > demo(nichehs) for demonstration of niche/habitat selection analysis > > Loading required package: gpclib > General Polygon Clipper Library for R (version 1.5-1) > Type 'class ? gpc.poly' for help
great, so it works in R. > > Then I wrote command to the Python console: > > import rpy2 as rpy2 > > answer from Python: > > Pri súšťaní kódu v Pythone nastala chyba: > > Traceback (most recent call last): > File "C:\Users\Vlado/.qgis/python/plugins\manageR\manageR.py", line 2110, > in commandOutput > self.appendText(unicode(output)) > File "C:\Users\Vlado/.qgis/python/plugins\manageR\manageR.py", line 2057, > in appendText > cursor = self.textCursor() > RuntimeError: underlying C/C++ object has been deleted Puzzling. Why is manageR interfering? Try to disable it via Manage Plugins and rerun the command. There are already a lot of variables in the problem... thanks for testing, regards, Anne > Verzia Pythonu: > 2.5.2 (r252:60911, Feb 21 2008, 13:11:45) [MSC v.1310 32 bit (Intel)] > QGIS version: > 1.5.0-Tethys Tethys, 13923M > > Cesta k Pythonu: ['C:/PROGRA~1/QUANTU~1/apps/qgis/./python', > 'C:\\Users\\Vlado/.qgis/python', 'C:\\Users\\Vlado/.qgis/python/plugins', > 'C:/PROGRA~1/QUANTU~1/apps/qgis/./python/plugins', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\gdal-16\\pymod', 'C:\\Program Files\\Quantum > GIS Tethys', 'C:\\PROGRA~1\\QUANTU~1\\bin\\python25.zip', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\DLLs', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\lib', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\lib\\plat-win', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\lib\\lib-tk', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\qgis\\bin', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\lib\\site-packages', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\lib\\site-packages\\win32', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\lib\\site-packages\\win32\\lib', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\lib\\site-packages\\Pythonwin', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\lib\\site-packages\\wx-2.8-msw-unicode', > u'C:/Users/Vlado/.qgis//python/plugins', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\qgis\\python\\plugins\\fTools\\tools', > '/usr/share/qgis/python', '.'] > > command import rpy2.robjects as ro > > answer: > > Pri súšťaní kódu v Pythone nastala chyba: > > Traceback (most recent call last): > File "C:\Users\Vlado/.qgis/python/plugins\manageR\manageR.py", line 2110, > in commandOutput > self.appendText(unicode(output)) > File "C:\Users\Vlado/.qgis/python/plugins\manageR\manageR.py", line 2057, > in appendText > cursor = self.textCursor() > RuntimeError: underlying C/C++ object has been deleted > > Verzia Pythonu: > 2.5.2 (r252:60911, Feb 21 2008, 13:11:45) [MSC v.1310 32 bit (Intel)] > > > QGIS version: > 1.5.0-Tethys Tethys, 13923M > > Cesta k Pythonu: ['C:/PROGRA~1/QUANTU~1/apps/qgis/./python', > 'C:\\Users\\Vlado/.qgis/python', 'C:\\Users\\Vlado/.qgis/python/plugins', > 'C:/PROGRA~1/QUANTU~1/apps/qgis/./python/plugins', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\gdal-16\\pymod', 'C:\\Program Files\\Quantum > GIS Tethys', 'C:\\PROGRA~1\\QUANTU~1\\bin\\python25.zip', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\DLLs', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\lib', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\lib\\plat-win', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\lib\\lib-tk', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\qgis\\bin', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\lib\\site-packages', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\lib\\site-packages\\win32', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\lib\\site-packages\\win32\\lib', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\lib\\site-packages\\Pythonwin', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\Python25\\lib\\site-packages\\wx-2.8-msw-unicode', > u'C:/Users/Vlado/.qgis//python/plugins', > 'C:\\PROGRA~1\\QUANTU~1\\apps\\qgis\\python\\plugins\\fTools\\tools', > '/usr/share/qgis/python', '.'] > > > Vlado > > ----- Original Message ----- From: "Anne Ghisla" <a.ghi...@gmail.com> > To: <blackday...@gmail.com> > Cc: "Animal Movement" <animov@faunalia.it> > Sent: Sunday, October 03, 2010 4:14 PM > Subject: Re: [AniMov] problem with instalation of adehabitat > > >> On Sun, Oct 3, 2010 at 3:50 PM, <blackday...@gmail.com> wrote: >>> >>> Hi Anne, >>> >>> sorry, but I forgot send information about my system... System: >>> >>> - Windows Vista - OS >>>> >>>> - QGIS version - 1.5.0 Tethys >>>> - how did you install QGIS - standalone installer >>>> - R version - 2.11.1 >>>> - adehabitat version: see - I dont know... But I install adehabitat from >>>> Slovakia server via R - install packages >>>> - Python version - I installed Python 3.1.2 program >>> >>> Please help me with this installation, I use Arcview 3 with Animal >>> Movement >>> extension for analyses, but I prefer opensource solution ... :-) >> >> R 2.11 and Python 3. are untested so far; actually, the standalone >> QGIS carries its own Python so there is no problem on this side. >> >> you can test this code into R console: >> >> require(adehabitat) >> >> and see if it loads the package correctly. >> >> If it doesn't, it's a R/adehabitat issue. Please post details (see >> sessionInfo() function ) >> If R loads adehabitat, pass to QGIS Python Console (last item in >> Plugins menu) and type: >> >> import rpy2 as rpy2 >> import rpy2.robjects as ro >> print ro.r.require('adehabitat') >> >> let us know if there are any errors there. If so, please post the >> error messages. >> >> regards, >> Anne >> >>> Best wishes, >>> >>> Vlado Nemcek >>> >>> >>> ----- Original Message ----- From: "Anne Ghisla" <a.ghi...@gmail.com> >>> To: <blackday...@gmail.com>; "Animal Movement" <animov@faunalia.it> >>> Sent: Sunday, October 03, 2010 12:15 PM >>> Subject: Re: [AniMov] problem with instalation of adehabitat >>> >>> >>>> On Sat, 2010-10-02 at 17:06 +0200, blackday...@gmail.com wrote: >>>>> >>>>> Dear users of quantum GIS, >>>>> >>>>> I have a problem with installation of adehabitat on my computer. I >>>>> download and install animove and R to the PC. But when I want >>>>> calculate the MCP or kernel polygon, then my PC put up the message - >>>>> >>>>> R error (please consult its documentation) is: >>>>> >>>>> Error in function (x, method = c("mcp", "href", "lscv", "hadj", >>>>> "clusthr", : >>>>> >>>>> This procedure requires adehabitat to be installed >>>>> >>>>> >>>>> >>>>> But I have R and adehabitat - I install and download adehabitat from >>>>> server with R... Please can you write me detailed installation of >>>>> adehabitat - step by step... >>>> >>>> Hi Vlado, >>>> >>>> we would help you right now but you didn't tell us: >>>> - your operating system >>>> - QGIS version >>>> - how did you install QGIS (source, binary package, OSGeo4W, standalone) >>>> - R version >>>> - adehabitat version: see >>>> http://lists.faunalia.it/pipermail/animov/2010-September/000674.html >>>> - Python version >>>> >>>> that is important, each platform has its own answers: >>>> >>>> >>>> >>>> http://www.qgis.org/wiki/HomeRange_plugin#Installation_requirements_and_tested_platforms >>>> >>>> There are plenty of installation notes in the wiki and in the archives >>>> of this mailing list. Of course if your problem is not covered, send the >>>> list a mail with the details listed above, or better fill a ticket into >>>> >>>> https://www.faunalia.it/animove/trac/ >>>> >>>> regards, >>>> anne >>>> -- >>>> http://wiki.osgeo.org/wiki/Anne_Ghisla >>> >>> >> -- >> http://gis.fem-environment.eu/anne-ghisla/ > > -- http://gis.fem-environment.eu/anne-ghisla/ _______________________________________________ AniMov mailing list AniMov@faunalia.it http://lists.faunalia.it/cgi-bin/mailman/listinfo/animov