Can you please provide exact details where you find these two code snippets, e.g. help(<something>) and a URL. /H
On Fri, Aug 28, 2009 at 1:30 AM, ssv<ssv....@gmail.com> wrote: > > Hi All > > Here is my question: > > I was following tutorial posted online as well as the example scripts > that come with aroma.affymetrix package (installed on local machine). > > I have this question: What is the difference between following scripts > (all objects are created as per the tutorial online) ? Analysis is > done on two paired samples (normal1: tumor1). > > Script 1 (from the example script provided along with the R package) > > ========================== > # Use the robust average of the first array as a reference > cesR <- extract(cesN, 1); > cesL <- extract(cesN, 2); > ceR <- getAverageFile(cesR); > sm <- CbsModel(cesN, ceR); > ========================== > > Script 2 (as per online tutorial, for paired analysis) > ========================= > # Use the robust average of the first array as a reference > cesR <- extract(cesN, 1); > cesL <- extract(cesN, 2); > sm<-CbsModel(cesR,cesL) > ========================= > > suresh > > > --~--~---------~--~----~------------~-------~--~----~ When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group. To post to this group, send email to aroma-affymetrix@googlegroups.com To unsubscribe from this group, send email to aroma-affymetrix-unsubscr...@googlegroups.com For more options, visit this group at http://groups.google.com/group/aroma-affymetrix?hl=en -~----------~----~----~----~------~----~------~--~---
