Hi Henrik

That was an inadvertent mistake and I am sorry. I was looking at
another older post ( by title: use a few normal samples as the
reference set ). My doubts were almost cleared with that post and I
had a small doubt. I could not find "reply" button and i thought
"reply to author" button is 'reply' button (which is a mistake again).
I appreciate that you spend your valuable time to answer many
questions over here.

Thanks once again for the answer.
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When reporting problems on aroma.affymetrix, make sure 1) to run the latest 
version of the package, 2) to report the output of sessionInfo() and 
traceback(), and 3) to post a complete code example.


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