1) OTP _is_ the standard MFA. You have the choice between software and hardware 
solutions. Complain to companies still using SMS/Email/etc for second factor. 
Loudly, please.

2) Use a proper password manager to store your OTPURI and generate the tokens, 
as well as for storing your recovery codes. I'd recommend gopass if GPG, self 
management, and VCS sounds appealing, and 1Password if you'd rather have 
someone else handle the technicals.

3) WEB3 aims to provide such decentralized login based on some device you 
control as you are saying you want. Whether or not it replaces the current 
authentication model is another matter entirely.

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