i did not mean to implicate biocLite ... i am being too terse. i mention it because, after so many years of biocLite being spectacularly reliable ... persistence of a problem with its performance implies a serious upstream problem that would be very nice to eradicate ...
On Wed, Feb 1, 2017 at 1:15 AM, Levi Waldron <lwaldron.resea...@gmail.com> wrote: > > On Wed, Feb 1, 2017 at 12:51 AM, Martin Morgan < > martin.mor...@roswellpark.org> wrote: > >> Levi triggered the problem with install.packages("lazyeval", >> repos=biocinstallRepos(), which is an R-only command. Also, there have not >> been any changes to the logic of biocLite() in this regard, so the problem >> is likely to be in R (devel) per se. I'll try to get access to a Mac and >> investigate. > > > Yes, in fact, now I notice that it also happens with just > install.packages("lazyeval"), on the second invocation with the same repo > argument (although exiting and starting R again creates a new tmp directory > so gives another free invocation. Sorry for blaming it on biocLite(). > > -- > Levi Waldron > http://www.waldronlab.org > Assistant Professor of Biostatistics CUNY School of Public Health > US: +1 646-364-9616 <(646)%20364-9616> > Skype: levi.waldron > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel